RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 TMPRSS9Q7Z410 1059 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 OR5T3Q8NGG3 340 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ZDHHC12Q96GR4 267 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ZNF764Q96H86 408 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ZNF285Q96NJ3 590 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 SH3GL1Q99961 368 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 DUSP23Q9BVJ7 150 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 RPF2Q9H7B2 306 aaKnown RBP13.68□□□□□ -0.22
COL4A6-206ENST00000477085 CXorf36Q9H7Y0 433 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 TPT1P8Q9HAU6 139 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 GMEB1Q9Y692 573 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 PI4KAP42356 2102 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 TCRBV5S2A0A599 114 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 ZNF860A6NHJ4 632 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
COL4A6-206ENST00000477085 B4GALT2O60909 372 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 PPM1FP49593 454 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-206ENST00000477085 LIM2P55344 173 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 RHDQ02161 417 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 TGM3Q08188 693 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 KCNAB1Q14722 419 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 SUZ12Q15022 739 aaKnown RBP13.67□□□□□ -0.22
COL4A6-206ENST00000477085 ADRM1Q16186 407 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 ABHD13Q7L211 337 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 SPRED1Q7Z699 444 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 EID2Q8N6I1 236 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 OR2T12Q8NG77 320 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 AHCYL2Q96HN2 611 aaKnown RBP13.67□□□□□ -0.22
COL4A6-206ENST00000477085 C10orf90Q96M02 699 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 SERINC2Q96SA4 455 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 CSF3RQ99062 836 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 CHST8Q9H2A9 424 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 COPS7BQ9H9Q2 264 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-206ENST00000477085 SIRT3Q9NTG7 399 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-206ENST00000477085 TAS2R9Q9NYW1 312 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 EHD3Q9NZN3 535 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 UTS2RQ9UKP6 389 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 ACSL6Q9UKU0 697 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 NAALAD2Q9Y3Q0 740 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 SNX13Q9Y5W8 968 aa13.67□□□□□ -0.22
COL4A6-206ENST00000477085 PDPK1O15530 556 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 EPN2O95208 641 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 KCNK5O95279 499 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 NTRK1P04629 796 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 GGT1P19440 569 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 PTGER1P34995 402 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 CASP9P55211 416 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 AP2B1P63010 937 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 GPLD1P80108 840 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SLC34A1Q06495 639 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 LRRC74AQ0VAA2 488 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 ZC3H12BQ5HYM0 836 aaKnown RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 COX20Q5RI15 118 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 GLYATQ6IB77 296 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SLC48A1Q6P1K1 146 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 FAM181AQ8N9Y4 354 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 OR5AK3PQ8NH89 298 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 CNRIP1Q96F85 164 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 DPH2Q9BQC3 489 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 CCDC3Q9BQI4 270 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 NUDT22Q9BRQ3 303 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 FAIM2Q9BWQ8 316 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 ARRDC1-AS1Q9H2J1 176 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 GLIPR2Q9H4G4 154 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 EPS8L2Q9H6S3 715 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SLC35C2Q9NQQ7 365 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SEMA5BQ9P283 1151 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 DAPP1Q9UN19 280 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 VPS4AQ9UN37 437 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SLC22A7Q9Y694 548 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 R4GN57 208 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 CPED1A4D0V7 1026 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 URADA6NGE7 173 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 H3BMH7 237 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 DUX1O43812 170 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SRPX2O60687 465 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 GALR3O60755 368 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 BAG2O95816 211 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 NUDT7P0C024 238 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 CDK9P50750 372 aaKnown RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 CCT8P50990 548 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SESN3P58005 492 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 NR0B2Q15466 257 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 ZNF574Q6ZN55 896 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SERPINA11Q86U17 422 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 PTOV1Q86YD1 416 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 LILRA2Q8N149 483 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SUN3Q8TAQ9 357 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 OR5P2Q8WZ92 322 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 DUS3LQ96G46 650 aaKnown RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 ZNF681Q96N22 645 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 AMDHD1Q96NU7 426 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 CD180Q99467 661 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SLC35A5Q9BS91 424 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 CHRNA10Q9GZZ6 450 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SPRTNQ9H040 489 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms