RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ESRRBO95718 433 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 CHRNGP07510 517 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 CYC1P08574 325 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 PRR35P0CG20 571 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 ITGAMP11215 1152 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 SFTPCP11686 197 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 CPN2P22792 545 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 TPP2P29144 1249 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 PGDP52209 483 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 PKNOX1P55347 436 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 OR4D2P58180 307 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 HMGCS1Q01581 520 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 ID2Q02363 134 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 GALNT1Q10472 559 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 TBL3Q12788 808 aaKnown RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 SLC13A2Q13183 592 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 NADK2Q4G0N4 442 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 CFAP157Q5JU67 520 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 B3GNTL1Q67FW5 361 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 CLEC6AQ6EIG7 209 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 MRM1Q6IN84 353 aaKnown RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 PAPD4Q6PIY7 484 aaKnown RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 ZCCHC23Q6ZST2 131 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 OR4N5Q8IXE1 308 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 METTL4Q8N3J2 472 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 ZCCHC7Q8N3Z6 543 aaKnown RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 METTL6Q8TCB7 284 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 BRIX1Q8TDN6 353 aaKnown RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 ANKRD9Q96BM1 317 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 MAGEB10Q96LZ2 347 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 SERPINI1Q99574 410 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 ACPTQ9BZG2 426 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 LHPPQ9H008 270 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 DDX31Q9H8H2 851 aaKnown RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 PRDM9Q9NQV7 894 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 C19orf25Q9UFG5 118 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-208ENST00000476739 SNX6Q9UNH7 406 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 SLC12A4Q9UP95 1085 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 ASB4Q9Y574 426 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 CSAG2Q9Y5P2 127 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 PTGDR2Q9Y5Y4 395 aa9.09□□□□□ -0.95
HDAC3-208ENST00000476739 A0A1W2PR48 441 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 A0A1W2PS29 197 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 WDR91A4D1P6 747 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 GLOD5A6NK44 160 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 PCDH17O14917 1159 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 PROM1O43490 865 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 FGF17O60258 216 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 MAN1A2O60476 641 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 CTNSO60931 367 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 ULK1O75385 1050 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 SEMA3DO95025 777 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 SERPINA7P05543 415 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 ENO1P06733 434 aaKnown RBP9.08□□□□□ -0.96
HDAC3-208ENST00000476739 KLK1P06870 262 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 BPGMP07738 259 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 FAM58BPP0C7Q3 252 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 HMOX2P30519 316 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 TSFMP43897 325 aaKnown RBP9.08□□□□□ -0.96
HDAC3-208ENST00000476739 ST13P50502 369 aaKnown RBP9.08□□□□□ -0.96
HDAC3-208ENST00000476739 ARFIP1P53367 373 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 HSD17B7P56937 341 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 TNFRSF17Q02223 184 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 CASP8Q14790 479 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 BTBD16Q32M84 506 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 COMMD6Q7Z4G1 85 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 CUZD1Q86UP6 607 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 GPR180Q86V85 440 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 NUDT13Q86X67 352 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 KBTBD2Q8IY47 623 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF595Q8IYB9 648 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 MMP21Q8N119 569 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 KIF2BQ8N4N8 673 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 C1orf52Q8N6N3 182 aaKnown RBP9.08□□□□□ -0.96
HDAC3-208ENST00000476739 SIRT6Q8N6T7 355 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 RBMXL3Q8N7X1 1067 aaKnown RBP9.08□□□□□ -0.96
HDAC3-208ENST00000476739 NFAM1Q8NET5 270 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-208ENST00000476739 PGM2Q96G03 612 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 APIPQ96GX9 242 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 VPS50Q96JG6 964 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 NPAS2Q99743 824 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 CENPKQ9BS16 269 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 TUBB6Q9BUF5 446 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 MFRPQ9BY79 579 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 SLC29A3Q9BZD2 475 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 BRF2Q9HAW0 419 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 TMBIM4Q9HC24 238 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 PNO1Q9NRX1 252 aaKnown RBP9.08□□□□□ -0.96
HDAC3-208ENST00000476739 RIC8BQ9NVN3 520 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 TEX10Q9NXF1 929 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-208ENST00000476739 SENP1Q9P0U3 644 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 LUZP4Q9P127 313 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 PTGFRNQ9P2B2 879 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 MID2Q9UJV3 735 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 MMACHCQ9Y4U1 282 aa9.08□□□□□ -0.96
HDAC3-208ENST00000476739 TMEM233B4DJY2 109 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 B8ZZF3 427 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 CLDN4O14493 209 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms