RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TNFRSF4P43489 277 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 TSFMP43897 325 aaKnown RBP5.04□□□□□ -1.6
VPS50-212ENST00000476413 NSFP46459 744 aaKnown RBP5.04□□□□□ -1.6
VPS50-212ENST00000476413 SLC6A12P48065 614 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 CRIP2P52943 208 aaPredicted RBP5.04□□□□□ -1.6
VPS50-212ENST00000476413 PPP1R8Q12972 351 aaKnown RBP5.04□□□□□ -1.6
VPS50-212ENST00000476413 ZFP69Q49AA0 526 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 HERC4Q5GLZ8 1057 aaPredicted RBP5.04□□□□□ -1.6
VPS50-212ENST00000476413 FRRS1Q6ZNA5 592 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 ZNF329Q86UD4 541 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 C11orf45Q8TAV5 145 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 ZNF519Q8TB69 540 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 SLCO2A1Q92959 643 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 DUX3Q96PT4 197 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 ASCL2Q99929 193 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 WWP1Q9H0M0 922 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 DDX47Q9H0S4 455 aaKnown RBP5.04□□□□□ -1.6
VPS50-212ENST00000476413 MARCH7Q9H992 704 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 NDUFA13Q9P0J0 144 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 TEKT2Q9UIF3 430 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 LNPEPQ9UIQ6 1025 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 MRPS2Q9Y399 296 aaKnown RBP5.04□□□□□ -1.6
VPS50-212ENST00000476413 WIPI2Q9Y4P8 454 aa5.04□□□□□ -1.6
VPS50-212ENST00000476413 A0A0U1RRA0 63 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 PRR23D1E9PI22 279 aaPredicted RBP5.03□□□□□ -1.6
VPS50-212ENST00000476413 HSF2BPO75031 334 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 ATP6V1G1O75348 118 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 CSDE1O75534 798 aaKnown RBP5.03□□□□□ -1.6
VPS50-212ENST00000476413 REC8O95072 547 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 NXPH4O95158 308 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 RPLP0P05388 317 aaKnown RBP5.03□□□□□ -1.6
VPS50-212ENST00000476413 PGK2P07205 417 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 SFTPBP07988 381 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 ZSCAN5DPP0CG00 497 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 PRR23D2P0DMB1 279 aaPredicted RBP5.03□□□□□ -1.6
VPS50-212ENST00000476413 ETS1P14921 441 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 ZNF18P17022 549 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 HOXB6P17509 224 aaKnown RBP5.03□□□□□ -1.6
VPS50-212ENST00000476413 CCNA2P20248 432 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 FHITP49789 147 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 CYCSP99999 105 aaKnown RBP5.03□□□□□ -1.6
VPS50-212ENST00000476413 HSPA14Q0VDF9 509 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 NKAIN2Q5VXU1 208 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 TRIM65Q6PJ69 517 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 KIF6Q6ZMV9 814 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 WDR88Q6ZMY6 472 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 CHMP1BQ7LBR1 199 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 OR4N5Q8IXE1 308 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 OR9Q2Q8NGE9 314 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 RAB39BQ96DA2 213 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 ZNF274Q96GC6 653 aaPredicted RBP5.03□□□□□ -1.6
VPS50-212ENST00000476413 PCED1BQ96HM7 432 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 CXorf58Q96LI9 332 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 DGCR6LQ9BY27 220 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 KRTAP1-5Q9BYS1 174 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 SIRPDQ9H106 197 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 TRPV6Q9H1D0 765 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 GANQ9H2C0 597 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 MED20Q9H944 212 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 SCRT2Q9NQ03 307 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 SPHK2Q9NRA0 654 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 KLK11Q9UBX7 282 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 FAM153AQ9UHL3 310 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 NARFQ9UHQ1 456 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 CCPG1Q9ULG6 757 aa5.03□□□□□ -1.6
VPS50-212ENST00000476413 MRPS18CQ9Y3D5 142 aaKnown RBP5.03□□□□□ -1.6
VPS50-212ENST00000476413 MEX3AA1L020 520 aaKnown RBP5.02□□□□□ -1.61
VPS50-212ENST00000476413 CFAP73A6NFT4 308 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 MPTX1A8MV57 137 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 CCSO14618 274 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 STAM2O75886 525 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 DUS4LO95620 317 aaKnown RBP5.02□□□□□ -1.61
VPS50-212ENST00000476413 GSTA2P09210 222 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 RPA1P27694 616 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 STIP1P31948 543 aaKnown RBP5.02□□□□□ -1.61
VPS50-212ENST00000476413 GSCP56915 257 aaPredicted RBP5.02□□□□□ -1.61
VPS50-212ENST00000476413 CCZ1BP86790 482 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 CCZ1P86791 482 aaPredicted RBP5.02□□□□□ -1.61
VPS50-212ENST00000476413 DHODHQ02127 395 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 FAM189A2Q15884 450 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 TOR1AIP1Q5JTV8 583 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 OR6B2Q6IFH4 312 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 NEPROQ6NW34 567 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 Q71RC1 249 aaPredicted RBP5.02□□□□□ -1.61
VPS50-212ENST00000476413 ZER1Q7Z7L7 766 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 ADGRD2Q7Z7M1 963 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 ITIH5Q86UX2 942 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 C17orf64Q86WR6 236 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 CNNM3Q8NE01 707 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 OR6M1Q8NGM8 313 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 OR2T6Q8NHC8 308 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 LIPHQ8WWY8 451 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 P3H4Q92791 437 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 C11orf52Q96A22 123 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 SAMD8Q96LT4 415 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 FAM111AQ96PZ2 611 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 TAAR6Q96RI8 345 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 USP28Q96RU2 1077 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 ABCG4Q9H172 646 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 SLC26A1Q9H2B4 701 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms