RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 HSD17B7P56937 341 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 SLC13A2Q13183 592 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 TUBA3CQ13748 450 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 CPSF6Q16630 551 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL1A1-205ENST00000476387 KHDRBS2Q5VWX1 349 aaKnown RBP15.15■□□□□ 0.02
COL1A1-205ENST00000476387 TUBA3EQ6PEY2 450 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 MYO7BQ6PIF6 2116 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 LCA5Q86VQ0 697 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 FJX1Q86VR8 437 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 CRLF3Q8IUI8 442 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 LURAP1LQ8IV03 231 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 ZNF595Q8IYB9 648 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 MDS2Q8NDY4 140 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 HUS1BQ8NHY5 278 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 MTERF1Q99551 399 aaKnown RBP15.15■□□□□ 0.02
COL1A1-205ENST00000476387 UTP23Q9BRU9 249 aaKnown RBP15.15■□□□□ 0.02
COL1A1-205ENST00000476387 NOL11Q9H8H0 719 aaKnown RBP15.15■□□□□ 0.02
COL1A1-205ENST00000476387 NECTIN3Q9NQS3 549 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 SEC14L3Q9UDX4 400 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 DAPP1Q9UN19 280 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 TSC22D4Q9Y3Q8 395 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 SYNDIG1LA6NDD5 238 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 H0YIV9 168 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 RTCAO00442 366 aaKnown RBP15.14■□□□□ 0.01
COL1A1-205ENST00000476387 UNC5CO95185 931 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 CLDN9O95484 217 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 TAC1P20366 129 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 ATP5A1P25705 553 aaKnown RBP15.14■□□□□ 0.01
COL1A1-205ENST00000476387 C1QL3Q5VWW1 255 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 FCRLBQ6BAA4 426 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 SCUBE1Q8IWY4 988 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 ACOT4Q8N9L9 421 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 L3MBTL4Q8NA19 623 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.14■□□□□ 0.012e-12■■■■■ 101.6
COL1A1-205ENST00000476387 RGMAQ96B86 450 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 NPAS2Q99743 824 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 EPB41L4BQ9H329 900 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 OR51B5Q9H339 312 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 LYRM4Q9HD34 91 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 PRDM7Q9NQW5 492 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 TBK1Q9UHD2 729 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 PCTPQ9UKL6 214 aa15.14■□□□□ 0.01
COL1A1-205ENST00000476387 A8MT66 165 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 A8MUA0 341 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 SAP18O00422 153 aaKnown RBP15.13■□□□□ 0.01
COL1A1-205ENST00000476387 SCELO95171 688 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 HIST1H1TP22492 207 aaPredicted RBP15.13■□□□□ 0.01
COL1A1-205ENST00000476387 CD96P40200 585 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 RPS13P62277 151 aaKnown RBP15.13■□□□□ 0.01
COL1A1-205ENST00000476387 RBPJQ06330 500 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 OR1C1Q15619 314 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 DEPDC1Q5TB30 811 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 MTFR2Q6P444 385 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 ZNF793Q6ZN11 406 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 UBE3DQ7Z6J8 389 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 CLNKQ7Z7G1 428 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 RNF175Q8N4F7 328 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 HORMAD2Q8N7B1 307 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 OR52B6Q8NGF0 335 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 ACMSDQ8TDX5 336 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 ELP5Q8TE02 316 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 SCMH1Q96GD3 660 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 CSF3RQ99062 836 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 PNO1Q9NRX1 252 aaKnown RBP15.13■□□□□ 0.01
COL1A1-205ENST00000476387 SUCOQ9UBS9 1254 aaKnown RBP15.13■□□□□ 0.01
COL1A1-205ENST00000476387 ENTPD4Q9Y227 616 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 RNF11Q9Y3C5 154 aa15.13■□□□□ 0.01
COL1A1-205ENST00000476387 ABCA12Q86UK0 2595 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 ASPDHA6ND91 283 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 GABRR3A8MPY1 467 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 GOLGA8RI6L899 631 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 OR7A17O14581 309 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 MYO1DO94832 1006 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 MLYCDO95822 493 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 GSTA1P08263 222 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 RPS17P08708 135 aaKnown RBP15.12■□□□□ 0.01
COL1A1-205ENST00000476387 CD46P15529 392 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 CPN2P22792 545 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 PTX3P26022 381 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-205ENST00000476387 HNRNPFP52597 415 aaKnown RBP15.12■□□□□ 0.01
COL1A1-205ENST00000476387 STX4Q12846 297 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 TERF2Q15554 542 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 TTC19Q6DKK2 380 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-205ENST00000476387 OR4C11Q6IEV9 310 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 TMEM178AQ8NBL3 297 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 TMEM52Q8NDY8 209 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 NSUN5Q96P11 429 aaKnown RBP15.12■□□□□ 0.01
COL1A1-205ENST00000476387 SIGLEC12Q96PQ1 595 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 CDK15Q96Q40 435 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 MAPKAP1Q9BPZ7 522 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 NTMT1Q9BV86 223 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 PPCSQ9HAB8 311 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 ADAP2Q9NPF8 381 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 SEMA4BQ9NPR2 832 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-205ENST00000476387 PHF11Q9UIL8 331 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 FBXW2Q9UKT8 454 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 LRBAP50851 2863 aa15.12■□□□□ 0.01
COL1A1-205ENST00000476387 TRGV8A0A0C4DH27 118 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 CYR61O00622 381 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 PLPP1O14494 284 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms