RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 RNF6Q9Y252 685 aa6.69□□□□□ -1.34
UBE4B-208ENST00000475795 MRPS33Q9Y291 106 aaKnown RBP6.69□□□□□ -1.34
UBE4B-208ENST00000475795 PSAT1Q9Y617 370 aa6.69□□□□□ -1.34
UBE4B-208ENST00000475795 PRRC2AP48634 2157 aaKnown RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 EXPH5Q8NEV8 1989 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 ABCA4P78363 2273 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 A0A0G2JMM0 328 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 A0A1W2PPB8 328 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 A0A1W2PRS3 328 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 NKX2-6A6NCS4 301 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 ANKDD1BA6NHY2 528 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 FAM90A27PA6NNH2 459 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 KIR3DP1A8MWS1 328 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 FOXO6A8MYZ6 492 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 ACOT7O00154 380 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 CYR61O00622 381 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 CTNSO60931 367 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 PDE9AO76083 593 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 TOXO94900 526 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 GLSO94925 669 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 OR6B1O95007 311 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 WISP3O95389 354 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 CERS1P27544 350 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 MSX1P28360 303 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 HPDP32754 393 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 SOX3P41225 446 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 NR0B1P51843 470 aaKnown RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 LIM2P55344 173 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 ARL4CP56559 192 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 NUP107P57740 925 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 TAS2R39P59534 338 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 PPIAP62937 165 aaKnown RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 MGAT5Q09328 741 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 RCN2Q14257 317 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 TGFBIQ15582 683 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 XKR6Q5GH73 641 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 EMC4Q5J8M3 183 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 TRIM40Q6P9F5 258 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 IL20RBQ6UXL0 311 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 C16orf47Q6ZP98 133 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 RGS9BPQ6ZS82 235 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 SYDE1Q6ZW31 735 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 VN1R5Q7Z5H4 357 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 CLNKQ7Z7G1 428 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 ANKMY2Q8IV38 441 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 DMRTC2Q8IXT2 367 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 TCAIMQ8N3R3 496 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 RPRMLQ8N4K4 120 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 MORN4Q8NDC4 146 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 OR2M7Q8NG81 312 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 OR14A16Q8NHC5 309 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 ANKRD49Q8WVL7 239 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 DAZLQ92904 295 aaKnown RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 VPS39Q96JC1 886 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 CAPZA3Q96KX2 299 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 RASL10BQ96S79 203 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 SERINC2Q96SA4 455 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 CSF3RQ99062 836 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 TMEM79Q9BSE2 394 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 MCMBPQ9BTE3 642 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 CAPS2Q9BXY5 557 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 TTTY12Q9BZ98 90 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 UCK2Q9BZX2 261 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 DERL2Q9GZP9 239 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 DEFB127Q9H1M4 99 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 RHOJQ9H4E5 214 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 EHD1Q9H4M9 534 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 ZDHHC11Q9H8X9 412 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 COPS7BQ9H9Q2 264 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 LIN28AQ9H9Z2 209 aaKnown RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 POPDC3Q9HBV1 291 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 KCNJ16Q9NPI9 418 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 DNAJC11Q9NVH1 559 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 MOCS1Q9NZB8 636 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 MYOTQ9UBF9 498 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 VTI1BQ9UEU0 232 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 DAPP1Q9UN19 280 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 CLCA3PQ9Y6N3 262 aa6.68□□□□□ -1.34
UBE4B-208ENST00000475795 ZNF469Q96JG9 3925 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-208ENST00000475795 SETD2Q9BYW2 2564 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-208ENST00000475795 ANKHD1Q8IWZ3 2542 aaKnown RBP6.67□□□□□ -1.34
UBE4B-208ENST00000475795 OR14I1A6ND48 311 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 NCF1BA6NI72 391 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-208ENST00000475795 FAM166BA8MTA8 275 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 NCF1CA8MVU1 366 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-208ENST00000475795 C17orf105B2RV13 164 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 E7ESA3 106 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 NPIPA2E9PIF3 369 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 NPIPA3F8WFD2 350 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 WWP2O00308 870 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 CLGNO14967 610 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 TAPBPO15533 448 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 PRAMEF4O60810 478 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 SEC31AO94979 1220 aaKnown RBP6.67□□□□□ -1.34
UBE4B-208ENST00000475795 IGHG3P01860 377 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 IFNA16P05015 189 aa6.67□□□□□ -1.34
UBE4B-208ENST00000475795 HOXD4P09016 255 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-208ENST00000475795 NCF1P14598 390 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-208ENST00000475795 TCP1P17987 556 aaKnown RBP6.67□□□□□ -1.34
UBE4B-208ENST00000475795 ACVR2AP27037 513 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms