RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PITX1P78337 314 aaPredicted RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 PHC1P78364 1004 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 CDK10Q15131 360 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 NKAPLQ5M9Q1 402 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 NANOGP8Q6NSW7 305 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 GALNT12Q8IXK2 581 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 TSGA13Q96PP4 275 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 NANOGQ9H9S0 305 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 TEX13CA0A0J9YWL9 993 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 PMM2O15305 246 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 CSTAP01040 98 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SLC15A1P46059 708 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 RPS26P62854 115 aaKnown RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 ABHD18Q0P651 414 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SEC23BQ15437 767 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SFT2D3Q587I9 215 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 TMEM130Q8N3G9 435 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 DENND1AQ8TEH3 1009 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 GLYATL1Q969I3 302 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 RBP7Q96R05 134 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 ACTL8Q9H568 366 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 KCNK12Q9HB15 430 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 NAA10P41227 235 aaPredicted RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 HNRNPA0Q13151 305 aaKnown RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 GRB7Q14451 532 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 TRAM2Q15035 370 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 WDR45BQ5MNZ6 344 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 PLEKHS1Q5SXH7 462 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 FAM86B1Q8N7N1 296 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 GRPEL2Q8TAA5 225 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SUN5Q8TC36 379 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 GPR62Q9BZJ7 368 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 MRM3Q9HC36 420 aaKnown RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 POLE4Q9NR33 117 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 MT-ND5P03915 603 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 ACRV1P26436 265 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 ABHD5Q8WTS1 349 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 IGSF21Q96ID5 467 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SRA1Q9HD15 236 aaKnown RBP10.54□□□□□ -0.72
VAPB-204ENST00000475243 NANSQ9NR45 359 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 GPR34Q9UPC5 381 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 IRS2Q9Y4H2 1338 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SOCS5O75159 536 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 JUNDP17535 347 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 UQCRC2P22695 453 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 FAM76BQ5HYJ3 339 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 LIPKQ5VXJ0 399 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 ZNF572Q7Z3I7 529 aaPredicted RBP10.54□□□□□ -0.72
VAPB-204ENST00000475243 SEZ6LQ9BYH1 1024 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 STRADBQ9C0K7 418 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 RMI1Q9H9A7 625 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 STOX2Q9P2F5 926 aaPredicted RBP10.54□□□□□ -0.72
VAPB-204ENST00000475243 HCN4Q9Y3Q4 1203 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 RICTORQ6R327 1708 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SNED1Q8TER0 1413 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SHMT2P34897 504 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 ELOCQ15369 112 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 NCEH1Q6PIU2 408 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 LRFN4Q6PJG9 635 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 OR4N5Q8IXE1 308 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 LINC00471Q8N535 108 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 ACOT12Q8WYK0 555 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 KIAA1143Q96AT1 154 aaPredicted RBP10.54□□□□□ -0.72
VAPB-204ENST00000475243 TM9SF3Q9HD45 589 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 DKK3Q9UBP4 350 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 CICQ96RK0 1608 aaPredicted RBP10.54□□□□□ -0.72
VAPB-204ENST00000475243 PIRO00625 290 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SDC3O75056 442 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 ZNF821O75541 412 aaPredicted RBP10.54□□□□□ -0.72
VAPB-204ENST00000475243 ARL6IP5O75915 188 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SELENOVP59797 346 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SRYQ05066 204 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 FAM69BQ5VUD6 431 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 FIGNL1Q6PIW4 674 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 RAB11FIP2Q7L804 512 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 GATAD2BQ8WXI9 593 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 BADQ92934 168 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 NID2Q14112 1375 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 HEPACAM2A8MVW5 462 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 RNGTTO60942 597 aaKnown RBP10.54□□□□□ -0.72
VAPB-204ENST00000475243 FNTBP49356 437 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 PLP2Q04941 152 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SLCO2A1Q92959 643 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SLC45A1Q9Y2W3 748 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 OARD1Q9Y530 152 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 K7ERQ8 282 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SFTPBP07988 381 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 STOMP27105 288 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 GMPRP36959 345 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 KCNC1P48547 511 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 GINS1Q14691 196 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 FBXO43Q4G163 708 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 ARSKQ6UWY0 536 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 GPRIN1Q7Z2K8 1008 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 PDSS2Q86YH6 399 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 MINDY2Q8NBR6 621 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SEC14L1Q92503 715 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 MAPKAP1Q9BPZ7 522 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 SLC30A2Q9BRI3 323 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms