RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 GIMAP2Q9UG22 337 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TCFL5Q9UL49 500 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SNX6Q9UNH7 406 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 STK38LQ9Y2H1 464 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 MAP4K5Q9Y4K4 846 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ATG4BQ9Y4P1 393 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ASB4Q9Y574 426 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SPENQ96T58 3664 aaKnown RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 A0A1W2PR48 441 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 C21orf140B9A014 251 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 MASP2O00187 686 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 PIP5K1BO14986 540 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 PRKRAO75569 313 aaKnown RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 HSPA4LO95757 839 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 CLDN1O95832 211 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 ALBP02768 609 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 ZGLP1P0C6A0 271 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 LINC00032P0C843 101 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 HSD3B1P14060 373 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 FBLP22087 321 aaKnown RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 HSD3B2P26439 372 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 HMOX2P30519 316 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 XCR1P46094 333 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 AVPR1BP47901 424 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 ARFIP1P53367 373 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 MTTPP55157 894 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 LIM2P55344 173 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 HNRNPH2P55795 449 aaKnown RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF33BQ06732 778 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 KLC1Q07866 573 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 PRSS53Q2L4Q9 553 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 MLIPQ5VWP3 458 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 TTC19Q6DKK2 380 aaPredicted RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 OR4C11Q6IEV9 310 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 CHSY3Q70JA7 882 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 MED25Q71SY5 747 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 COMMD6Q7Z4G1 85 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 PPP1R32Q7Z5V6 425 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 ATCAYQ86WG3 371 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 PRSS58Q8IYP2 241 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 CLYBLQ8N0X4 340 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 MMP21Q8N119 569 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 ZCCHC7Q8N3Z6 543 aaKnown RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 C1orf52Q8N6N3 182 aaKnown RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 GOLGA6L1Q8N7Z2 621 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 OR2Y1Q8NGV0 311 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 TWIST2Q8WVJ9 160 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 CKAP2Q8WWK9 683 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 RGMAQ96B86 450 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 PEX11GQ96HA9 241 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 SLC45A3Q96JT2 553 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 MAGEB10Q96LZ2 347 aaPredicted RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 KCNC2Q96PR1 638 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 SERINC2Q96SA4 455 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 SERPINI1Q99574 410 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 GPR87Q9BY21 358 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 RBCK1Q9BYM8 510 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 VN1R1Q9GZP7 353 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 SOX17Q9H6I2 414 aaPredicted RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 WDR54Q9H977 334 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 GPN2Q9H9Y4 310 aaPredicted RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 MED4Q9NPJ6 270 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 THAP1Q9NVV9 213 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 SIRT5Q9NXA8 310 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 IFT80Q9P2H3 777 aaPredicted RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 VPS29Q9UBQ0 182 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF282Q9UDV7 671 aaPredicted RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 ANAPC2Q9UJX6 822 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 DAPP1Q9UN19 280 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 CDC14AQ9UNH5 594 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 SLC12A4Q9UP95 1085 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 FARSAQ9Y285 508 aaKnown RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.58□□□□□ -1.36
LIMD1-204ENST00000474665 FIS1Q9Y3D6 152 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 RAP2CQ9Y3L5 183 aa6.58□□□□□ -1.36
LIMD1-204ENST00000474665 TNRC6AQ8NDV7 1962 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 NAV3Q8IVL0 2385 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 IGKV3D-11A0A0A0MRZ8 115 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 ATP6AP2A0A1C7CYW4 349 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 A0A1W2PS29 197 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 URADA6NGE7 173 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 IDSB3KWA1 339 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 C9J4A7 227 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 LSM1O15116 133 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 PROM1O43490 865 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 B3GALT2O43825 422 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 B4GALT2O60909 372 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 CREG1O75629 220 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 ATP6AP2O75787 350 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 CDC123O75794 336 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 KLK1P06870 262 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 FHP07954 510 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 PRR35P0CG20 571 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 RNH1P13489 461 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 PRF1P14222 555 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 AGXTP21549 392 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 GNLYP22749 145 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 PRPH2P23942 346 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms