RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 TMEM251Q8N6I4 163 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 GRK7Q8WTQ7 553 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 MS4A6EQ96DS6 147 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 SCYL1Q96KG9 808 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 FOXC2Q99958 501 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 GPATCH1Q9BRR8 931 aaKnown RBP12.97□□□□□ -0.33
CCDC78-209ENST00000474647 NPLQ9BXD5 320 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-209ENST00000474647 OR8D2Q9GZM6 311 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 LIME1Q9H400 295 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 PRM3Q9NNZ6 103 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 VWA7Q9Y334 891 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 L3MBTL1Q9Y468 752 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 CLDN16Q9Y5I7 305 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 LRIT2A6NDA9 550 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 GLSO94925 669 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 P04436 131 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 ZNF37AP17032 561 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 GNAZP19086 355 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 TNNI3P19429 210 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 CNR1P21554 472 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 ADH7P40394 386 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 DLX5P56178 289 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 STX4Q12846 297 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 ZNF460Q14592 562 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 CYP1B1Q16678 543 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 C18orf21Q32NC0 220 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 HP1BP3Q5SSJ5 553 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 C1orf185Q5T7R7 199 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 WLSQ5T9L3 541 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 TEDDM1Q5T9Z0 273 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 RTL6Q6ICC9 239 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 ARSKQ6UWY0 536 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 TRILQ7L0X0 811 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 GALNT7Q86SF2 657 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 LIX1LQ8IVB5 337 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 ZNF595Q8IYB9 648 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 MMP21Q8N119 569 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 ZNF321PQ8N8H1 164 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 TTLQ8NG68 377 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 OR14A16Q8NHC5 309 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 DAZLQ92904 295 aaKnown RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 SLCO2A1Q92959 643 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 NINJ1Q92982 152 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 RMND5BQ96G75 393 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 CNPPD1Q9BV87 410 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 REXO4Q9GZR2 422 aaKnown RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 CLEC4MQ9H2X3 399 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 IL1RL2Q9HB29 575 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 SACM1LQ9NTJ5 587 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 TUBA8Q9NY65 449 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 ASIC3Q9UHC3 531 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 ST6GALNAC2Q9UJ37 374 aa12.96□□□□□ -0.33
CCDC78-209ENST00000474647 CORO1CQ9ULV4 474 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-209ENST00000474647 FAM221AA4D161 298 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 ANKDD1BA6NHY2 528 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 NCF1BA6NI72 391 aaPredicted RBP12.95□□□□□ -0.34
CCDC78-209ENST00000474647 NCF1CA8MVU1 366 aaPredicted RBP12.95□□□□□ -0.34
CCDC78-209ENST00000474647 C17orf105B2RV13 164 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 PGRMC1O00264 195 aaKnown RBP12.95□□□□□ -0.34
CCDC78-209ENST00000474647 AQP7O14520 342 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 WDR1O75083 606 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 LDB3O75112 727 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 CTAG2O75638 210 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 IGHG3P01860 377 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 C1GALT1C1LP0DN25 315 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 CCL3P10147 92 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 NCF1P14598 390 aaPredicted RBP12.95□□□□□ -0.34
CCDC78-209ENST00000474647 HOXB4P17483 251 aaPredicted RBP12.95□□□□□ -0.34
CCDC78-209ENST00000474647 UQCRC1P31930 480 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 GDF5P43026 501 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 LIM2P55344 173 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 IGDCC3Q8IVU1 814 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 KRT78Q8N1N4 520 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 GOLM1Q8NBJ4 401 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 MORN4Q8NDC4 146 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 OR2L5Q8NG80 312 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 SLC2A12Q8TD20 617 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 ZNF592Q92610 1267 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 SARAFQ96BY9 339 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 RUNDC3BQ96NL0 473 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 SERINC2Q96SA4 455 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 NAP1L3Q99457 506 aaPredicted RBP12.95□□□□□ -0.34
CCDC78-209ENST00000474647 NAT9Q9BTE0 207 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 ALOXE3Q9BYJ1 711 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 CXXC4Q9H2H0 198 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 ZNF358Q9NW07 568 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 DAPP1Q9UN19 280 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 CHMP2BQ9UQN3 213 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 PLEKHA6Q9Y2H5 1048 aa12.95□□□□□ -0.34
CCDC78-209ENST00000474647 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 SYNDIG1LA6NDD5 238 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 DNALI1O14645 258 aaPredicted RBP12.94□□□□□ -0.34
CCDC78-209ENST00000474647 CLGNO14967 610 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 DRD2P14416 443 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 DNASE1P24855 282 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 KIR2DL3P43628 341 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 HNMTP50135 292 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 MTTPP55157 894 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms