RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	SYT15	Q9BQS2	421 aa		3.97	□□□□□ -1.77
BBX-223	ENST00000473542	PINK1	Q9BXM7	581 aa		3.97	□□□□□ -1.77
BBX-223	ENST00000473542	DDX47	Q9H0S4	455 aa	Known RBP	3.97	□□□□□ -1.77
BBX-223	ENST00000473542	C1orf21	Q9H246	121 aa		3.97	□□□□□ -1.77
BBX-223	ENST00000473542	SYTL2	Q9HCH5	934 aa		3.97	□□□□□ -1.77
BBX-223	ENST00000473542	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.97	□□□□□ -1.77
BBX-223	ENST00000473542	MTF2	Q9Y483	593 aa	Predicted RBP	3.97	□□□□□ -1.77
BBX-223	ENST00000473542	ZHX2	Q9Y6X8	837 aa		3.97	□□□□□ -1.77
BBX-223	ENST00000473542	FGD5	Q6ZNL6	1462 aa		3.97	□□□□□ -1.77
BBX-223	ENST00000473542	RTCA	O00442	366 aa	Known RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	TRAFD1	O14545	582 aa	Predicted RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	OGT	O15294	1046 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	SIGLEC5	O15389	551 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	TNFSF12	O43508	249 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	PGK2	P07205	417 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	GLRA1	P23415	457 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	MAPK3	P27361	379 aa	Predicted RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	MMP12	P39900	470 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	SLC6A12	P48065	614 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	FHIT	P49789	147 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	CRYBA2	P53672	197 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	BACE1	P56817	501 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	KRTAP10-12	P60413	245 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	GALK2	Q01415	458 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	IL1RL1	Q01638	556 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	SMC1A	Q14683	1233 aa	Known RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	HEPACAM	Q14CZ8	416 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	PDK1	Q15118	436 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	ZFP69	Q49AA0	526 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	TTC31	Q49AM3	519 aa	Predicted RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	RFTN2	Q52LD8	501 aa	Predicted RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	BSPRY	Q5W0U4	402 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	KIF6	Q6ZMV9	814 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	CACUL1	Q86Y37	369 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	ZNF614	Q8N883	585 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	ADAD2	Q8NCV1	583 aa	Known RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	TMEM185A	Q8NFB2	350 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	NUP37	Q8NFH4	326 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	RPLP0P6	Q8NHW5	317 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	U2AF1L4	Q8WU68	220 aa	Known RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	ERGIC2	Q96RQ1	377 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	AGPAT1	Q99943	283 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	GPN1	Q9HCN4	374 aa	Predicted RBP	3.96	□□□□□ -1.78
BBX-223	ENST00000473542	ZDHHC18	Q9NUE0	388 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	NDE1	Q9NXR1	346 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	KLK11	Q9UBX7	282 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	DNPEP	Q9ULA0	475 aa		3.96	□□□□□ -1.78
BBX-223	ENST00000473542	MACROD2	A1Z1Q3	448 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	ARHGAP42	A6NI28	874 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	LINC01565	O15544	149 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	SSX5	O60225	188 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	PRPSAP2	O60256	369 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	ECE2	O60344	883 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	ATP6V1G1	O75348	118 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	NXPH4	O95158	308 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	TXNDC12	O95881	172 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	RPLP0	P05388	317 aa	Known RBP	3.95	□□□□□ -1.78
BBX-223	ENST00000473542	CCDC192	P0DO97	292 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	PRKACG	P22612	351 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	TNFRSF4	P43489	277 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	ZFP36L2	P47974	494 aa	Known RBP	3.95	□□□□□ -1.78
BBX-223	ENST00000473542	HNRNPF	P52597	415 aa	Known RBP	3.95	□□□□□ -1.78
BBX-223	ENST00000473542	CRIP2	P52943	208 aa	Predicted RBP	3.95	□□□□□ -1.78
BBX-223	ENST00000473542	EVC	P57679	992 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	BPIFB3	P59826	476 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	SRP54	P61011	504 aa	Known RBP	3.95	□□□□□ -1.78
BBX-223	ENST00000473542	CDKL1	Q00532	357 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	DHODH	Q02127	395 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	RIG	Q13278	110 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	MPPE1	Q53F39	396 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	LCE1F	Q5T754	118 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	NKAIN2	Q5VXU1	208 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	CES4A	Q5XG92	561 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	TRIM65	Q6PJ69	517 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	OLFM4	Q6UX06	510 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	CDHR3	Q6ZTQ4	885 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	C1orf186	Q6ZWK4	172 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	WDSUB1	Q8N9V3	476 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	LEMD2	Q8NC56	503 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	CCDC197	Q8NCU1	140 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	OR9Q2	Q8NGE9	314 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	OR52E1	Q8NGJ3	308 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	OR6F1	Q8NGZ6	308 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	ZNF519	Q8TB69	540 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	C11orf52	Q96A22	123 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	ZNF274	Q96GC6	653 aa	Predicted RBP	3.95	□□□□□ -1.78
BBX-223	ENST00000473542	ZNF577	Q9BSK1	485 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	DGCR6L	Q9BY27	220 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	ATG10	Q9H0Y0	220 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	HSD3B7	Q9H2F3	369 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	DPEP3	Q9H4B8	488 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	DCLRE1B	Q9H816	532 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	C3orf14	Q9HBI5	128 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	B3GAT2	Q9NPZ5	323 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	HOMER3	Q9NSC5	361 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	DDX28	Q9NUL7	540 aa	Known RBP	3.95	□□□□□ -1.78
BBX-223	ENST00000473542	MED17	Q9NVC6	651 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	CACNG5	Q9UF02	275 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	NARF	Q9UHQ1	456 aa		3.95	□□□□□ -1.78
BBX-223	ENST00000473542	HOOK1	Q9UJC3	728 aa	Known RBP	3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms