RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 MYOTQ9UBF9 498 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 TRMT6Q9UJA5 497 aaKnown RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 GUCA1BQ9UMX6 200 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 SONP18583 2426 aaKnown RBP8.61□□□□□ -1.03
VCL-204ENST00000472585 ATP6AP2A0A1C7CYW4 349 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 A0A1W2PPR1 153 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 MAGEB16A2A368 324 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 OR14I1A6ND48 311 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 A8MVJ9 347 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 SYT5O00445 386 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CYR61O00622 381 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 NRDCO43847 1150 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 PRAMEF4O60810 478 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 BANF1O75531 89 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ATP6AP2O75787 350 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ZFAND5O76080 213 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CCL3P10147 92 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 PAMP19021 973 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CNR1P21554 472 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CCND1P24385 295 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 TACR1P25103 407 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 HNRNPH1P31943 449 aaKnown RBP8.61□□□□□ -1.03
VCL-204ENST00000472585 AHRP35869 848 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 HK2P52789 917 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 BTN3A2P78410 334 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 RGS1Q08116 209 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CSHL1Q14406 222 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 DAZAP2Q15038 168 aaPredicted RBP8.61□□□□□ -1.03
VCL-204ENST00000472585 TERF2Q15554 542 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 HYAL4Q2M3T9 481 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 TOR1AIP1Q5JTV8 583 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 Q5PR19 223 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 PRAMEF9Q5VWM5 478 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ADNP2Q6IQ32 1131 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 NXPE4Q6UWF7 544 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ABHD13Q7L211 337 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 VN1R5Q7Z5H4 357 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CLNKQ7Z7G1 428 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 IGDCC3Q8IVU1 814 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 C2CD4AQ8NCU7 369 aaPredicted RBP8.61□□□□□ -1.03
VCL-204ENST00000472585 MCUQ8NE86 351 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 FBXL8Q96CD0 374 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 VMP1Q96GC9 406 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 QRFPRQ96P65 431 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CSF3RQ99062 836 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 SH3GL2Q99962 352 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 HAUS8Q9BT25 410 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 RBSNQ9H1K0 784 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CCDC68Q9H2F9 335 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 CLK4Q9HAZ1 481 aaKnown RBP8.61□□□□□ -1.03
VCL-204ENST00000472585 SH2D2AQ9NP31 389 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 HPF1Q9NWY4 346 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ARL15Q9NXU5 204 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ALKBH4Q9NXW9 302 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ADAM21Q9UKJ8 722 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ACAD8Q9UKU7 415 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 ERVK-11Q9UQG0 969 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 SLC22A14Q9Y267 594 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 COMMD10Q9Y6G5 202 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 EML6Q6ZMW3 1958 aa8.61□□□□□ -1.03
VCL-204ENST00000472585 LRIT2A6NDA9 550 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 TUBAL3A6NHL2 446 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 CES2O00748 559 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 CLDN4O14493 209 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 AQP7O14520 342 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 WDR1O75083 606 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 GUCA1CO95843 209 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 KRT14P02533 472 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 SERPINA6P08185 405 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 MLNP12872 115 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 CD53P19397 219 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 CXCR5P32302 372 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 PIGAP37287 484 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 SP140Q13342 867 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 RBBP5Q15291 538 aaKnown RBP8.6□□□□□ -1.03
VCL-204ENST00000472585 PPP1R3AQ16821 1122 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 C1orf185Q5T7R7 199 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 WLSQ5T9L3 541 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 HECTD2Q5U5R9 776 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 ARMC3Q5W041 872 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 SBSNQ6UWP8 590 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 RGS9BPQ6ZS82 235 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 SLC22A16Q86VW1 577 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 THOC6Q86W42 341 aaKnown RBP8.6□□□□□ -1.03
VCL-204ENST00000472585 CIARTQ8N365 385 aaPredicted RBP8.6□□□□□ -1.03
VCL-204ENST00000472585 VWA5B2Q8N398 1253 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 NAT8LQ8N9F0 302 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 FAM47BQ8NA70 645 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 TNIP2Q8NFZ5 429 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 ASB15Q8WXK1 588 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 MS4A6EQ96DS6 147 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 SECISBP2Q96T21 854 aaKnown RBP8.6□□□□□ -1.03
VCL-204ENST00000472585 YIPF4Q9BSR8 244 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 PLEKHF2Q9H8W4 249 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 IL1RL2Q9HB29 575 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 PRTFDC1Q9NRG1 225 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 FOXD3Q9UJU5 478 aaPredicted RBP8.6□□□□□ -1.03
VCL-204ENST00000472585 ATG4BQ9Y4P1 393 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 MMACHCQ9Y4U1 282 aa8.6□□□□□ -1.03
VCL-204ENST00000472585 HSPB2A8KAH6 182 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms