RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 FTCDO95954 541 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 SERPINA6P08185 405 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 RNF4P78317 190 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 BTN3A2P78410 334 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 CCZ1BP86790 482 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 CCZ1P86791 482 aaPredicted RBP17.5■□□□□ 0.39
SORT1-203ENST00000471996 REEP5Q00765 189 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 DHX9Q08211 1270 aaKnown RBP17.5■□□□□ 0.39
SORT1-203ENST00000471996 RUNX2Q13950 521 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 CSHL1Q14406 222 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 ADGRD1Q6QNK2 874 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 YTHDF3Q7Z739 585 aaKnown RBP17.5■□□□□ 0.39
SORT1-203ENST00000471996 ZNF595Q8IYB9 648 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 SYCE1Q8N0S2 351 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 LRRC25Q8N386 305 aaPredicted RBP17.5■□□□□ 0.39
SORT1-203ENST00000471996 LIX1Q8N485 282 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 ZNF321PQ8N8H1 164 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 MORN4Q8NDC4 146 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 OR5L2Q8NGL0 311 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 SLC5A11Q8WWX8 675 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 PIGTQ969N2 578 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 NEIL2Q969S2 332 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 NPLQ9BXD5 320 aaPredicted RBP17.5■□□□□ 0.39
SORT1-203ENST00000471996 SH2D2AQ9NP31 389 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 QPCTLQ9NXS2 382 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 JKAMPQ9P055 326 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 BOKQ9UMX3 212 aaPredicted RBP17.5■□□□□ 0.39
SORT1-203ENST00000471996 REXO2Q9Y3B8 237 aaKnown RBP17.5■□□□□ 0.39
SORT1-203ENST00000471996 SYNDIG1LA6NDD5 238 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 TRIM64A6NGJ6 449 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 TRIM64BA6NI03 449 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 NRDCO43847 1150 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 IFNA16P05015 189 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 HIST1H2AGP0C0S8 130 aaPredicted RBP17.49■□□□□ 0.39
SORT1-203ENST00000471996 HIST1H2ADP20671 130 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 RGS4P49798 205 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 CDK16Q00536 496 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 THOC5Q13769 683 aaKnown RBP17.49■□□□□ 0.39
SORT1-203ENST00000471996 SIX1Q15475 284 aaPredicted RBP17.49■□□□□ 0.39
SORT1-203ENST00000471996 TOR1AIP1Q5JTV8 583 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 ARMC3Q5W041 872 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 SLC22A10Q63ZE4 541 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 C4orf22Q6V702 233 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 PTPMT1Q8WUK0 201 aaPredicted RBP17.49■□□□□ 0.39
SORT1-203ENST00000471996 HSPBAP1Q96EW2 488 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 HES6Q96HZ4 224 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 HIST1H2AHQ96KK5 128 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 HIST1H2AJQ99878 128 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 H2AFJQ9BTM1 129 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 OR8D2Q9GZM6 311 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 TRMT6Q9UJA5 497 aaKnown RBP17.49■□□□□ 0.39
SORT1-203ENST00000471996 ARHGAP21Q5T5U3 1957 aa17.49■□□□□ 0.39
SORT1-203ENST00000471996 LRRC3CA6NJW4 275 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 EEF1E1-BLOC1S5C9J1V9 151 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 EEF1E1O43324 174 aaKnown RBP17.48■□□□□ 0.39
SORT1-203ENST00000471996 C8BP07358 591 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 CTSSP25774 331 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 TRPC1P48995 793 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 AGFG1P52594 562 aaKnown RBP17.48■□□□□ 0.39
SORT1-203ENST00000471996 RAB38P57729 211 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 DHX34Q14147 1143 aaKnown RBP17.48■□□□□ 0.39
SORT1-203ENST00000471996 RBBP5Q15291 538 aaKnown RBP17.48■□□□□ 0.39
SORT1-203ENST00000471996 NSUN5P2Q63ZY6 315 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 CLNKQ7Z7G1 428 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 OR14A16Q8NHC5 309 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 PAQR8Q8TEZ7 354 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 ISL2Q96A47 359 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 FAR2Q96K12 515 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 WDR83Q9BRX9 315 aaKnown RBP17.48■□□□□ 0.39
SORT1-203ENST00000471996 VTI1BQ9UEU0 232 aa17.48■□□□□ 0.39
SORT1-203ENST00000471996 MRPS33Q9Y291 106 aaKnown RBP17.48■□□□□ 0.39
SORT1-203ENST00000471996 C15orf38-AP3S2A0A0A6YYH1 394 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 TCRBV7S3A2A0A539 114 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 CRLF1O75462 422 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 IPO7O95373 1038 aaKnown RBP17.47■□□□□ 0.39
SORT1-203ENST00000471996 IL18BPO95998 194 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 BMP7P18075 431 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 TPSB2P20231 275 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 OPRM1P35372 400 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 SLC1A2P43004 574 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 KCNJ2P63252 427 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 TIAL1Q01085 375 aaKnown RBP eCLIP17.47■□□□□ 0.39
SORT1-203ENST00000471996 CRYZQ08257 329 aaKnown RBP17.47■□□□□ 0.39
SORT1-203ENST00000471996 TBL3Q12788 808 aaKnown RBP17.47■□□□□ 0.39
SORT1-203ENST00000471996 DUSP8Q13202 625 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 TPSAB1Q15661 275 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 MPEG1Q2M385 716 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 ZNF791Q3KP31 576 aaPredicted RBP17.47■□□□□ 0.39
SORT1-203ENST00000471996 PIGGQ5H8A4 983 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 UGT3A1Q6NUS8 523 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 CASC4Q6P4E1 433 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 MYO1HQ8N1T3 1032 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 GPATCH11Q8N954 259 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 FAM47BQ8NA70 645 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 GAL3ST3Q96A11 431 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 TSNARE1Q96NA8 513 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 TIMP4Q99727 224 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 AIF1LQ9BQI0 150 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 PELI2Q9HAT8 420 aa17.47■□□□□ 0.39
SORT1-203ENST00000471996 ARL15Q9NXU5 204 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms