RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880		H0YIV9	168 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	PLPP1	O14494	284 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	MAN1A2	O60476	641 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	UGDH	O60701	494 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	GBA	P04062	536 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	SRSF11	Q05519	484 aa	Known RBP	13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	FHL5	Q5TD97	284 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	TIFAB	Q6ZNK6	161 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	RPS19BP1	Q86WX3	136 aa	Known RBP	13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	CCDC63	Q8NA47	563 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	OR4F6	Q8NGB9	312 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	TRPC4AP	Q8TEL6	797 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	ALOXE3	Q9BYJ1	711 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	LYRM4	Q9HD34	91 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
SSR4-208	ENST00000471880		V9GYY5	206 aa	Predicted RBP	13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	POLE	Q07864	2286 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880		A0A1W2PPM1	405 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	ARHGAP10	A1A4S6	786 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	CLEC18A	A5D8T8	446 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	ANKUB1	A6NFN9	424 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	CYR61	O00622	381 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	FCHO1	O14526	889 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	PRAMEF2	O60811	474 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	CTNS	O60931	367 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	RASAL1	O95294	804 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	OTC	P00480	354 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	TLX1	P31314	330 aa	Predicted RBP	13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	BUD31	P41223	144 aa	Predicted RBP	13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	CLCN2	P51788	898 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	PMP22	Q01453	160 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	TUBA3C	Q13748	450 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	UBAP2L	Q14157	1087 aa	Known RBP	13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	E2F2	Q14209	437 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	OR1C1	Q15619	314 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	ZNF766	Q5HY98	468 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	METTL2B	Q6P1Q9	378 aa	Known RBP	13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	TUBA3E	Q6PEY2	450 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	CLEC18B	Q6UXF7	455 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	GPR180	Q86V85	440 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	SCUBE1	Q8IWY4	988 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	OR4N5	Q8IXE1	308 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	TMEM132C	Q8N3T6	1108 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	FAM26E	Q8N5C1	309 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	BCORP1	Q8N888	145 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	L3MBTL4	Q8NA19	623 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	CLEC18C	Q8NCF0	446 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	B3GNT7	Q8NFL0	401 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	EPS8L3	Q8TE67	593 aa	Known RBP	13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	NCLN	Q969V3	563 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	C5orf34	Q96MH7	638 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	SERPINI1	Q99574	410 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	EPB41L4B	Q9H329	900 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	WDR41	Q9HAD4	459 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	ADAP2	Q9NPF8	381 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	OLAH	Q9NV23	265 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	PHF11	Q9UIL8	331 aa		13.84	□□□□□ -0.19
SSR4-208	ENST00000471880	UTP20	O75691	2785 aa	Known RBP	13.83	□□□□□ -0.19
SSR4-208	ENST00000471880	DIDO1	Q9BTC0	2240 aa	Known RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	GLOD5	A6NK44	160 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	TGFBR3L	H3BV60	316 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	EED	O75530	441 aa	Known RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	PRKRA	O75569	313 aa	Known RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	OR4F21	O95013	312 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	ETHE1	O95571	254 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	RPS17	P08708	135 aa	Known RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	COX7A2	P14406	83 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	CD46	P15529	392 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	ATP5F1	P24539	256 aa	Predicted RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	TPP2	P29144	1249 aa	Predicted RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	HERVK_113	P63132	956 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	PCDH1	Q08174	1060 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	IFFO1	Q0D2I5	559 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	TRAF3	Q13114	568 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	SERTAD2	Q14140	314 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	ELAVL1	Q15717	326 aa	Known RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	FRG2	Q64ET8	278 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	C18orf63	Q68DL7	685 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	SPINK14	Q6IE38	97 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	NUDT13	Q86X67	352 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	HORMAD2	Q8N7B1	307 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	CCNYL1	Q8N7R7	359 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	EIF1AD	Q8N9N8	165 aa	Known RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	WDR20	Q8TBZ3	569 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	ACMSD	Q8TDX5	336 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	ELP5	Q8TE02	316 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	ZNF483	Q8TF39	744 aa	Predicted RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	SELENOM	Q8WWX9	145 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	DAZL	Q92904	295 aa	Known RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	VMP1	Q96GC9	406 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	DGAT2	Q96PD7	388 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	SIGLEC12	Q96PQ1	595 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	FRG2B	Q96QU4	278 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	HBEGF	Q99075	208 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	NPAS2	Q99743	824 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	ERVK-6	Q9BXR3	956 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	OR8D2	Q9GZM6	311 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	RNF32	Q9H0A6	362 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	RPF2	Q9H7B2	306 aa	Known RBP	13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	ANKZF1	Q9H8Y5	726 aa		13.83	□□□□□ -0.2

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