RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 HACD2Q6Y1H2 254 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 KIAA0907Q7Z7F0 614 aaPredicted RBP8.24□□□□□ -1.09
CD47-204ENST00000471694 MRPL41Q8IXM3 137 aaKnown RBP8.24□□□□□ -1.09
CD47-204ENST00000471694 TBC1D21Q8IYX1 336 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 FANK1Q8TC84 345 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 TMEM41AQ96HV5 264 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 NELFAQ9H3P2 528 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PEAK1Q9H792 1746 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 SGK494L7N484 410 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 CXCR6O00574 342 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PORP16435 677 aaPredicted RBP8.24□□□□□ -1.09
CD47-204ENST00000471694 ENGP17813 658 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 IRF9Q00978 393 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ST3GAL3Q11203 375 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 MPP2Q14168 576 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 NFE2L1Q14494 772 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 RBM48Q5RL73 367 aaKnown RBP8.24□□□□□ -1.09
CD47-204ENST00000471694 EGFLAMQ63HQ2 1017 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 FSTL4Q6MZW2 842 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PIGWQ7Z7B1 504 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 TICAM1Q8IUC6 712 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 CLIP4Q8N3C7 705 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 MREGQ8N565 214 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 AMER2Q8N7J2 671 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 OR9A4Q8NGU2 314 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 COQ8AQ8NI60 647 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PCDH19Q8TAB3 1148 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ACOT12Q8WYK0 555 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ANKRD7Q92527 254 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 UFD1Q92890 307 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 BMFQ96LC9 184 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PBX4Q9BYU1 374 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 AGXT2Q9BYV1 514 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 FOXQ1Q9C009 403 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 SLC40A1Q9NP59 571 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 OBP2BQ9NPH6 170 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PLIN4Q96Q06 1357 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 A0A087WUU8 490 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 BCKDKO14874 412 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ZBTB22O15209 634 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PRAMEF2O60811 474 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PTHP01270 115 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 HMGN1P05114 100 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ABHD2P08910 425 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 PCSK2P16519 638 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 TMEM44Q2T9K0 475 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ANKRD26P1Q6NSI1 321 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 TMEM200AQ86VY9 491 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ZC3HC1Q86WB0 502 aaKnown RBP8.24□□□□□ -1.09
CD47-204ENST00000471694 OR10T2Q8NGX3 314 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 OR56A3Q8NH54 315 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 FIBINQ8TAL6 211 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ADAMTS19Q8TE59 1207 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 ATXN2LQ8WWM7 1075 aaKnown RBP8.24□□□□□ -1.09
CD47-204ENST00000471694 NMD3Q96D46 503 aaKnown RBP8.24□□□□□ -1.09
CD47-204ENST00000471694 ACTRT3Q9BYD9 372 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 NLE1Q9NVX2 485 aaPredicted RBP8.24□□□□□ -1.09
CD47-204ENST00000471694 TAAR2Q9P1P5 351 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 R4GN57 208 aa8.24□□□□□ -1.09
CD47-204ENST00000471694 GABRR3A8MPY1 467 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 DLL1O00548 723 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 PIRO00625 290 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 TNFRSF21O75509 655 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 CBX6O95503 412 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 CHRM1P11229 460 aaPredicted RBP8.23□□□□□ -1.09
CD47-204ENST00000471694 IFI30P13284 250 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 PVALBP20472 110 aaPredicted RBP8.23□□□□□ -1.09
CD47-204ENST00000471694 MAGEA8P43361 318 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 PON3Q15166 354 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 ZNF423Q2M1K9 1284 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 LIN52Q52LA3 116 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 C9orf135Q5VTT2 229 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 NCBP2-AS2Q69YL0 99 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 TTC27Q6P3X3 843 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 TLDC1Q6P9B6 456 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 DRICH1Q6PGQ1 229 aaPredicted RBP8.23□□□□□ -1.09
CD47-204ENST00000471694 ZNF765Q7L2R6 523 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 PDSS2Q86YH6 399 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 TCEAL8Q8IYN2 117 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 RNF175Q8N4F7 328 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 DEFB124Q8NES8 71 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 SLC6A18Q96N87 628 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 DNMT3BQ9UBC3 853 aaKnown RBP8.23□□□□□ -1.09
CD47-204ENST00000471694 CYTH4Q9UIA0 394 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 ANKRD30BLA7E2S9 258 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 J3QLW9 94 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 ONECUT3O60422 494 aaPredicted RBP8.23□□□□□ -1.09
CD47-204ENST00000471694 ZNF19P17023 458 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 EFR3AQ14156 821 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 KLHL22Q53GT1 634 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 IDNKQ5T6J7 187 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 OR4C11Q6IEV9 310 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 OR4F3Q6IEY1 312 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 ALYREFQ86V81 257 aaKnown RBP8.23□□□□□ -1.09
CD47-204ENST00000471694 TP53INP2Q8IXH6 220 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 KLHL36Q8N4N3 616 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 LRRC17Q8N6Y2 441 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 GLB1L3Q8NCI6 653 aaPredicted RBP8.23□□□□□ -1.09
CD47-204ENST00000471694 RAB39BQ96DA2 213 aa8.23□□□□□ -1.09
CD47-204ENST00000471694 RBM4BQ9BQ04 359 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms