RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 STAB1Q9NY15 2570 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 EEF1E1-BLOC1S5C9J1V9 151 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 INAFM1C9JVW0 142 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 TGFBR3LH3BV60 316 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 CES2O00748 559 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 EEF1E1O43324 174 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 SMPD2O60906 423 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 SMIM10L1P0DMW3 83 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 SLC1A2P43004 574 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 KCNJ2P63252 427 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 CDK16Q00536 496 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 ELAVL1Q15717 326 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 ANKRD53Q8N9V6 530 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 SIMC1Q8NDZ2 872 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 OR5L2Q8NGL0 311 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 CCT6BQ92526 530 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 SMIM10Q96HG1 83 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 OR4K3Q96R72 315 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 AIF1LQ9BQI0 150 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 TRIM54Q9BYV2 358 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 MAD1L1Q9Y6D9 718 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 FREM3P0C091 2139 aa17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 FBN1P35555 2871 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-209ENST00000470006 NCKAP5O14513 1909 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 C15orf38-AP3S2A0A0A6YYH1 394 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 TCRBV7S3A2A0A539 114 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 CTAGE15A4D2H0 777 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 HAUS5O94927 633 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 GUCA1CO95843 209 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 TPSB2P20231 275 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 AGFG1P52594 562 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 HNRNPFP52597 415 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 STXBP1P61764 594 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 RUNX2Q13950 521 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 TPSAB1Q15661 275 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 CTAGE6Q86UF2 777 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 TMEM52Q8NDY8 209 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 OR56A3Q8NH54 315 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 LINGO1Q96FE5 620 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 Q96MF0 132 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 RUNDC3BQ96NL0 473 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 NDNQ99608 321 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 BDH2Q9BUT1 245 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 TRIM5Q9C035 493 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 C20orf96Q9NUD7 363 aaPredicted RBP17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 BOKQ9UMX3 212 aaPredicted RBP17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 PCDHGB3Q9Y5G1 929 aa17.49■□□□□ 0.39
NCKIPSD-209ENST00000470006 NINQ8N4C6 2090 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 AHRRA9YTQ3 701 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 C4orf51C9J302 202 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 EPPINO95925 133 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 SERPINA6P08185 405 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 RFPL3SP0C7P2 107 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 CEACAM8P31997 349 aaPredicted RBP17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 RAB38P57729 211 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 RNF4P78317 190 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 REEP5Q00765 189 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 KIF5AQ12840 1032 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 STX4Q12846 297 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 SIX1Q15475 284 aaPredicted RBP17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 KCTD19Q17RG1 926 aaPredicted RBP17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 ACSF3Q4G176 576 aaPredicted RBP17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 SLC22A10Q63ZE4 541 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 PAQR3Q6TCH7 311 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 TMPRSS11BQ86T26 416 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 LACC1Q8IV20 430 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZNF595Q8IYB9 648 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZNF321PQ8N8H1 164 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 MORN4Q8NDC4 146 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 OR14A16Q8NHC5 309 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 NEIL3Q8TAT5 605 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 ATL1Q8WXF7 558 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZNF592Q92610 1267 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 HOMER3Q9NSC5 361 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 FBXO5Q9UKT4 447 aa17.48■□□□□ 0.39
NCKIPSD-209ENST00000470006 MAGEB16A2A368 324 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 KDM4EB2RXH2 506 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 B3GALT2O43825 422 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZNF354AO60765 605 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 GOSR1O95249 250 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 HRGP04196 525 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZNF136P52737 540 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 CCNG2Q16589 344 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 BBS9Q3SYG4 887 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 PRAMEF20Q5VT98 475 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 RAD9BQ6WBX8 426 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 CXorf67Q86X51 503 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 GPATCH11Q8N954 259 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 CALML6Q8TD86 181 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 HSPBAP1Q96EW2 488 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 NPLQ9BXD5 320 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 ALOXE3Q9BYJ1 711 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZNF703Q9H7S9 590 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 PELI2Q9HAT8 420 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZFP64Q9NPA5 681 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 TAS2R13Q9NYV9 303 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 COPS7AQ9UBW8 275 aa17.47■□□□□ 0.39
NCKIPSD-209ENST00000470006 A0A088AWK7 358 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 SYNDIG1LA6NDD5 238 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 C17orf105B2RV13 164 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms