RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 UGT1A8Q9HAW9 530 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 FANCEQ9HB96 536 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 G6PC2Q9NQR9 355 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 THSD1Q9NS62 852 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 NDUFAF4Q9P032 175 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 RAB21Q9UL25 225 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 RPS6KL1Q9Y6S9 549 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 COL5A1P20908 1838 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 TMEM131Q92545 1883 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 TP53BP1Q12888 1972 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 C17orf113A0A1B0GUU1 675 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 FAM237BA0A1B0GVD1 139 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 FAM90A20PA6NIJ5 464 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 C10orf142B7Z368 130 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 PRYO14603 147 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 PRMT5O14744 637 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CHUKO15111 745 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 LDB2O43679 373 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CSO75390 466 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 VAPBO95292 243 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 SOD1P00441 154 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 GOT2P00505 430 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CHRM5P08912 532 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 OGNP20774 298 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CCT5P48643 541 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 PRLHRP49683 370 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 RGS4P49798 205 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 AGTR2P50052 363 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 EIF3BP55884 814 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 TUBB4BP68371 445 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 SHC2P98077 582 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 TLE3Q04726 772 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 TRA2AQ13595 282 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 NAA25Q14CX7 972 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 RPS6KA2Q15349 733 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 SHBQ15464 509 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 SMAD1Q15797 465 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 BCL7AQ4VC05 210 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 PRAMEF17Q5VTA0 474 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 LRRC8EQ6NSJ5 796 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 GUSBP11Q6P575 273 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 WASH2PQ6VEQ5 465 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 PACS1Q6VY07 963 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 PRIMA1Q86XR5 153 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CFAP206Q8IYR0 622 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CNPY4Q8N129 248 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 WDR36Q8NI36 951 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 ZFPM2Q8WW38 1151 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 AKAP1Q92667 903 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 SGF29Q96ES7 293 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 C12orf66Q96MD2 445 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 NSMCE3Q96MG7 304 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 SERPINB12Q96P63 405 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CARD6Q9BX69 1037 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 RAB11FIP5Q9BXF6 653 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 FAM129AQ9BZQ8 928 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 SLC7A5P2Q9GIP4 190 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 TCEAL2Q9H3H9 227 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 LRRN3Q9H3W5 708 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 FAM96AQ9H5X1 160 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 WASH6PQ9NQA3 447 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CHRAC1Q9NRG0 131 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 FAM114A2Q9NRY5 505 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 C20orf96Q9NUD7 363 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 IMP3Q9NV31 184 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 INTS10Q9NVR2 710 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 UTP6Q9NYH9 597 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 POLG2Q9UHN1 485 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 IKBKGQ9Y6K9 419 aa6.01□□□□□ -1.45
PTCD3-208ENST00000469585 TDRD6O60522 2096 aaKnown RBP6.01□□□□□ -1.45
PTCD3-208ENST00000469585 CCDC162PA2VCL2 907 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 LILRA5A6NI73 299 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 MBD3L5A6NJ08 208 aaPredicted RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 EIF3HO15372 352 aaKnown RBP eCLIP6□□□□□ -1.45
PTCD3-208ENST00000469585 TTI1O43156 1089 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 VPS26AO75436 327 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 PEPDP12955 493 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 GM2AP17900 193 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 IGFBP2P18065 325 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 XRCC1P18887 633 aaPredicted RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 PHBP35232 272 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 MAGEA6P43360 314 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 FASLGP48023 281 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 CD151P48509 253 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 DRG2P55039 364 aaKnown RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 MAZP56270 477 aaKnown RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 TAS2R50P59544 299 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 DMPKQ09013 629 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 OLIG2Q13516 323 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 KCNJ11Q14654 390 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 SIX1Q15475 284 aaPredicted RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 TBRG1Q3YBR2 411 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 GLE1Q53GS7 698 aaKnown RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 SPANXN3Q5MJ09 141 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF470Q6ECI4 717 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 KIAA0930Q6ICG6 404 aaPredicted RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 DGAT2L7PQ6IED9 249 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 NEPROQ6NW34 567 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 WDR93Q6P2C0 686 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 TTC27Q6P3X3 843 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms