RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GABPB2Q8TAK5 448 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-203ENST00000467533 SLC22A8Q8TCC7 542 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 NT5CQ8TCD5 201 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 PAQR8Q8TEZ7 354 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 SLC44A1Q8WWI5 657 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 DAZLQ92904 295 aaKnown RBP9.36□□□□□ -0.91
HDAC3-203ENST00000467533 TRMT61AQ96FX7 289 aaKnown RBP9.36□□□□□ -0.91
HDAC3-203ENST00000467533 RUNDC3BQ96NL0 473 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 TM9SF2Q99805 663 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 DOHHQ9BU89 302 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 UGT2B28Q9BY64 529 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 ANGPTL4Q9BY76 406 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 OR8D2Q9GZM6 311 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 ACBD3Q9H3P7 528 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 GOLPH3Q9H4A6 298 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 CLK4Q9HAZ1 481 aaKnown RBP9.36□□□□□ -0.91
HDAC3-203ENST00000467533 GALPQ9UBC7 116 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 PCDHA13Q9Y5I0 950 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 URADA6NGE7 173 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 ZBTB14O43829 449 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF189O75820 626 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-203ENST00000467533 SERPINC1P01008 464 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 SRD5A1P18405 259 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 LOXP28300 417 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-203ENST00000467533 THBS2P35442 1172 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 SKIV2L2P42285 1042 aaKnown RBP9.35□□□□□ -0.91
HDAC3-203ENST00000467533 SLCO1A2P46721 670 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 HSD17B7P56937 341 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 ASPHQ12797 758 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 CUL1Q13616 776 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF791Q3KP31 576 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-203ENST00000467533 TTLL9Q3SXZ7 439 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 C12orf54Q6X4T0 127 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF704Q6ZNC4 412 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-203ENST00000467533 FAM71DQ8N9W8 422 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 FAM47BQ8NA70 645 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 MORN4Q8NDC4 146 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 OR8K3Q8NH51 312 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 OR14A16Q8NHC5 309 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 UCN3Q969E3 161 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 ANKRD9Q96BM1 317 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-203ENST00000467533 SPACA9Q96E40 222 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-203ENST00000467533 WDYHV1Q96HA8 205 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 MARK4Q96L34 752 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 BIRC8Q96P09 236 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 ADAM19Q9H013 955 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 TMEM160Q9NX00 188 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 CAPN11Q9UMQ6 739 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 LAMP3Q9UQV4 416 aa9.35□□□□□ -0.91
HDAC3-203ENST00000467533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDAC3-203ENST00000467533 MYOCOSA0A1B0GUC4 107 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 TRBC2A0A5B9 178 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 SYNDIG1LA6NDD5 238 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 H0Y3Z8 333 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 AKR1B10O60218 316 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 GPRIN2O60269 458 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 RCBTB2O95199 551 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 ACSL3O95573 720 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 C1QAP02745 245 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 ESR1P03372 595 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CFPP27918 469 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CCKARP32238 428 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CD79BP40259 229 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 RPL21P46778 160 aaKnown RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CDK9P50750 372 aaKnown RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CCR8P51685 355 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 HNRNPFP52597 415 aaKnown RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CASP9P55211 416 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 BBS9Q3SYG4 887 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 UBAP2Q5T6F2 1119 aaKnown RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 PLXDC2Q6UX71 529 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 RBM43Q6ZSC3 357 aaKnown RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 UBE2R2Q712K3 238 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF611Q8N823 705 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 PRELID2Q8N945 189 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 TMEM52Q8NDY8 209 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 OR10G3Q8NGC4 313 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 ZPLD1Q8TCW7 415 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 SLC2A12Q8TD20 617 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 LPGAT1Q92604 370 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 PEX13Q92968 403 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 ABTB1Q969K4 478 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 QRFPRQ96P65 431 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 TUBA1CQ9BQE3 449 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 SLCO5A1Q9H2Y9 848 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 PROK2Q9HC23 129 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 ZNHIT6Q9NWK9 470 aaKnown RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CNIH4Q9P003 139 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 COPS7AQ9UBW8 275 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 MRPS33Q9Y291 106 aaKnown RBP9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CRYL1Q9Y2S2 319 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 CLDN16Q9Y5I7 305 aa9.34□□□□□ -0.91
HDAC3-203ENST00000467533 NINQ8N4C6 2090 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-203ENST00000467533 C4orf51C9J302 202 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 GFYI3L273 518 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 HS3ST1O14792 307 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 MSTNO14793 375 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 PFDN6O15212 129 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms