RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 CA13Q8N1Q1 262 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 METTL27Q8N6F8 245 aaPredicted RBP11.48□□□□□ -0.57
VPS16-206ENST00000466415 FAM47BQ8NA70 645 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 AGBL5Q8NDL9 886 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 OR4A15Q8NGL6 344 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 ZFP28Q8NHY6 868 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 GTF2H4Q92759 462 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 ZNF501Q96CX3 271 aaPredicted RBP11.48□□□□□ -0.57
VPS16-206ENST00000466415 LRRC58Q96CX6 371 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 MMABQ96EY8 250 aaPredicted RBP11.48□□□□□ -0.57
VPS16-206ENST00000466415 ZNF764Q96H86 408 aaPredicted RBP11.48□□□□□ -0.57
VPS16-206ENST00000466415 GBP5Q96PP8 586 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 OR6C1Q96RD1 312 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 PANX1Q96RD7 426 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 BBS4Q96RK4 519 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 CADM1Q9BY67 442 aaKnown RBP11.48□□□□□ -0.57
VPS16-206ENST00000466415 STRADBQ9C0K7 418 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 MMADHCQ9H3L0 296 aaPredicted RBP11.48□□□□□ -0.57
VPS16-206ENST00000466415 SPAG4Q9NPE6 437 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 HCN3Q9P1Z3 774 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 MAP10Q9P2G4 905 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 BTNL2Q9UIR0 455 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 UTS2RQ9UKP6 389 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 PSME2Q9UL46 239 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 CDC14AQ9UNH5 594 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 SRPK3Q9UPE1 567 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 EXO1Q9UQ84 846 aaKnown RBP11.48□□□□□ -0.57
VPS16-206ENST00000466415 MAN2B2Q9Y2E5 1009 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 RRP15Q9Y3B9 282 aaKnown RBP11.48□□□□□ -0.57
VPS16-206ENST00000466415 RALGAPA1Q6GYQ0 2036 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 USP34Q70CQ2 3546 aa11.48□□□□□ -0.57
VPS16-206ENST00000466415 A0A1W2PRB8 838 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 H0YIG0 161 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 RNASET2O00584 256 aaKnown RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 PROM1O43490 865 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 GDF9O60383 454 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 PRKRAO75569 313 aaKnown RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 ERAL1O75616 437 aaKnown RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 ABCB1P08183 1280 aaPredicted RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 RNH1P13489 461 aaKnown RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 EFNA1P20827 205 aaPredicted RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 ALAS2P22557 587 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 SOAT1P35610 550 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 TRPC1P48995 793 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 RUNX2Q13950 521 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 C6orf163Q5TEZ5 329 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 C18orf63Q68DL7 685 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 SLC48A1Q6P1K1 146 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 B3GNT8Q7Z7M8 397 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 TMEM126BQ8IUX1 230 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 KIAA2013Q8IYS2 634 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 CLECL1Q8IZS7 167 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 ARHGEF39Q8N4T4 335 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 TRIML2Q8N7C3 387 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 OR5T3Q8NGG3 340 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 CIDECQ96AQ7 238 aaPredicted RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 MVB12AQ96EY5 273 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 ZBED6CLQ96FA7 236 aaPredicted RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 CCDC115Q96NT0 180 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 CGREF1Q99674 301 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 SLC39A3Q9BRY0 314 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 CLK4Q9HAZ1 481 aaKnown RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 C5AR2Q9P296 337 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 MRPS33Q9Y291 106 aaKnown RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 PCDHGA1Q9Y5H4 931 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 ZNF780BQ9Y6R6 833 aa11.47□□□□□ -0.57
VPS16-206ENST00000466415 MDC1Q14676 2089 aaKnown RBP11.47□□□□□ -0.57
VPS16-206ENST00000466415 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 A0A1B0GX78 115 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 GLOD5A6NK44 160 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 TMX2-CTNND1H3BSU7 103 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 DSCR3O14972 297 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 ZNF749O43361 778 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 CHST10O43529 356 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 FOXS1O43638 330 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 PDE5AO76074 875 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 C6orf47O95873 294 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 FBLP22087 321 aaKnown RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 CCKBRP32239 447 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 GPC1P35052 558 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 SLC7A2P52569 658 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 MANFP55145 182 aaKnown RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 WNT3P56703 355 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 SNRPNP63162 240 aaKnown RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 PHC1P78364 1004 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 ZFP36L1Q07352 338 aaKnown RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 C16orf72Q14CZ0 275 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 SAMD4BQ5PRF9 694 aaKnown RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 ZNF621Q6ZSS3 439 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 PPP1R3BQ86XI6 285 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 SCUBE1Q8IWY4 988 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 ULK2Q8IYT8 1036 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 SAMD14Q8IZD0 417 aaPredicted RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 DNAJB14Q8TBM8 379 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 CDRT15Q96T59 188 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 CSF3RQ99062 836 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 SH3GL1Q99961 368 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 INPP5KQ9BT40 448 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms