RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 GULP1Q9UBP9 304 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 PLEKHB1Q9UF11 243 aaPredicted RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 APOBEC3BQ9UH17 382 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 DCDC2Q9UHG0 476 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 VPS9D1Q9Y2B5 631 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 MRPS7Q9Y2R9 242 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 ARL2BPQ9Y2Y0 163 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 NPFFR2Q9Y5X5 522 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 A0A0U1RQK1 487 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ZNF320A2RRD8 509 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 C9orf172C9J069 976 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 CCRL2O00421 344 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 DNALI1O14645 258 aaPredicted RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 TM9SF1O15321 606 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 B4GAT1O43505 415 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 GMDSO60547 372 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 CCDC22O60826 627 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 NDUFS6O75380 124 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RECQL5O94762 991 aaPredicted RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RPP14O95059 124 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 CCNB2O95067 398 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 HTR3BO95264 441 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 WDPCPO95876 746 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SOD1P00441 154 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 HBQ1P09105 142 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 GNAO1P09471 354 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ALPIP09923 528 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ERVK-10P10266 1014 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RALBP11234 206 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ENO3P13929 434 aaPredicted RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 TSHRP16473 764 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 NFKB1P19838 968 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 CA4P22748 312 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RBL1P28749 1068 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 VIPR1P32241 457 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 HMGCLP35914 325 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 TAGLN2P37802 199 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 CD79BP40259 229 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 KIR3DL2P43630 455 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 P2RY4P51582 365 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 STC1P52823 247 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RIPPLY3P57055 190 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RPL26P61254 145 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RPS26P62854 115 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 POLR2LP62875 67 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 GUCY1A3Q02108 690 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ILF2Q12905 390 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 EIF3IQ13347 325 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 MTM1Q13496 603 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 NFYCQ13952 458 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RPS6KA1Q15418 735 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SIX1Q15475 284 aaPredicted RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ADIPOQQ15848 244 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 DUSP7Q16829 419 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SGO1Q5FBB7 561 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 CDKL4Q5MAI5 379 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ZNF569Q5MCW4 686 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 LRRC66Q68CR7 880 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 C5orf46Q6UWT4 87 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 DTX1Q86Y01 620 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 NUDCD3Q8IVD9 361 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 KLHDC8BQ8IXV7 354 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 PHACTR4Q8IZ21 702 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ADGRG5Q8IZF4 528 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ZNF567Q8N184 647 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 PELI3Q8N2H9 469 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SLC35F6Q8N357 371 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 FAM109AQ8N4B1 249 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 OR4D10Q8NGI6 311 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 OR13C3Q8NGS6 347 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SPATA22Q8NHS9 363 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SLC35B2Q8TB61 432 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 DTD1Q8TEA8 209 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 CHPT1Q8WUD6 406 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 DNAJA4Q8WW22 397 aaPredicted RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 DTD2Q96FN9 168 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SCRN2Q96FV2 425 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 PDXPQ96GD0 296 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 OXNAD1Q96HP4 312 aaPredicted RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 BIRC8Q96P09 236 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RAB3IPQ96QF0 476 aaPredicted RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 GFM1Q96RP9 751 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RBM15Q96T37 977 aaKnown RBP eCLIP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 VAT1Q99536 393 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 TMEM79Q9BSE2 394 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ZSCAN5AQ9BUG6 496 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SF3B5Q9BWJ5 86 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SORBS1Q9BX66 1292 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SLC12A9Q9BXP2 914 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 STRADBQ9C0K7 418 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 TIGARQ9NQ88 270 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 MBNL1Q9NR56 388 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 RUVBL2Q9Y230 463 aaKnown RBP6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 CHKBQ9Y259 395 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 ACOT9Q9Y305 439 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 HS3ST3A1Q9Y663 406 aa6.99□□□□□ -1.29
RPUSD3-212ENST00000466141 SPENQ96T58 3664 aaKnown RBP6.98□□□□□ -1.29
RPUSD3-212ENST00000466141 A0A0U1RQS6 177 aa6.98□□□□□ -1.29
RPUSD3-212ENST00000466141 hCG_1807616A0A1W2PRN6 198 aa6.98□□□□□ -1.29
RPUSD3-212ENST00000466141 A1L4Q6 167 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms