RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NAA20P61599 178 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 PHEXP78562 749 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 GALNT1Q10472 559 aaPredicted RBP16.58■□□□□ 0.24
VPS52-214ENST00000463486 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.24
VPS52-214ENST00000463486 RIPOR1Q6ZS17 1223 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 METTL4Q8N3J2 472 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 METTL6Q8TCB7 284 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 SELENOMQ8WWX9 145 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 HBEGFQ99075 208 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 MECRQ9BV79 373 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 MRPL1Q9BYD6 325 aaKnown RBP16.58■□□□□ 0.24
VPS52-214ENST00000463486 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.24
VPS52-214ENST00000463486 MID1IP1Q9NPA3 183 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 PRTFDC1Q9NRG1 225 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 FBXW2Q9UKT8 454 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 STK38LQ9Y2H1 464 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 ZNF451Q9Y4E5 1061 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 TIMM22Q9Y584 194 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 NBASA2RRP1 2371 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 A0A1W2PR48 441 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 SERTM1A2A2V5 107 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 WASHC1A8K0Z3 465 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 TRIM13O60858 407 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 PPP2R1BP30154 601 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 ARRB2P32121 409 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 RAP1GDS1P52306 607 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 OR4D2P58180 307 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 C19orf57Q0VDD7 668 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 C18orf63Q68DL7 685 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 H3F3CQ6NXT2 135 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 PAPD4Q6PIY7 484 aaKnown RBP16.57■□□□□ 0.24
VPS52-214ENST00000463486 GPR180Q86V85 440 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 CCDC63Q8NA47 563 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 M1APQ8TC57 530 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 BRIX1Q8TDN6 353 aaKnown RBP16.57■□□□□ 0.24
VPS52-214ENST00000463486 UCN3Q969E3 161 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 ANKRD9Q96BM1 317 aaPredicted RBP16.57■□□□□ 0.24
VPS52-214ENST00000463486 C11orf24Q96F05 449 aaPredicted RBP16.57■□□□□ 0.24
VPS52-214ENST00000463486 CENPKQ9BS16 269 aa16.57■□□□□ 0.24
VPS52-214ENST00000463486 PPIEQ9UNP9 301 aaKnown RBP16.57■□□□□ 0.24
VPS52-214ENST00000463486 CLDN4O14493 209 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 ULK1O75385 1050 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 ERLIN1O75477 346 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 KRT6AP02538 564 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 GBAP04062 536 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 KRT6BP04259 564 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 FAM58BPP0C7Q3 252 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 ICAM2P13598 275 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 KRT6CP48668 564 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 GPR143P51810 404 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 SLC26A5P58743 744 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 IGLV3-21P80748 117 aaPredicted RBP16.56■□□□□ 0.24
VPS52-214ENST00000463486 ZNF33BQ06732 778 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 KLRB1Q12918 225 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 NADK2Q4G0N4 442 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 COLEC12Q5KU26 742 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 AGAP7PQ5VUJ5 663 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 CES4AQ5XG92 561 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 JMJD6Q6NYC1 403 aaPredicted RBP16.56■□□□□ 0.24
VPS52-214ENST00000463486 NUDT13Q86X67 352 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 ELP5Q8TE02 316 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 CHTF18Q8WVB6 975 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 AGAP4Q96P64 663 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 LPAR4Q99677 370 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 NPAS2Q99743 824 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 ACPTQ9BZG2 426 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 IQCGQ9H095 443 aaKnown RBP16.56■□□□□ 0.24
VPS52-214ENST00000463486 MMP25Q9NPA2 562 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 MID2Q9UJV3 735 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 ADAM29Q9UKF5 820 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 SLC12A4Q9UP95 1085 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 MRPS33Q9Y291 106 aaKnown RBP16.56■□□□□ 0.24
VPS52-214ENST00000463486 TENM4Q6N022 2769 aa16.56■□□□□ 0.24
VPS52-214ENST00000463486 MYO18BQ8IUG5 2567 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 SAGE2PA6NJ88 616 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 PRKRAO75569 313 aaKnown RBP16.55■□□□□ 0.24
VPS52-214ENST00000463486 BPGMP07738 259 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 DHRS4L1P0CG22 281 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 HSD3B1P14060 373 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 CPN2P22792 545 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 HSD3B2P26439 372 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 SERPINB3P29508 390 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 TNFRSF17Q02223 184 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 ACTN3Q08043 901 aaPredicted RBP16.55■□□□□ 0.24
VPS52-214ENST00000463486 CSTF3Q12996 717 aaKnown RBP16.55■□□□□ 0.24
VPS52-214ENST00000463486 SLC13A2Q13183 592 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 RCN2Q14257 317 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 CFAP157Q5JU67 520 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 B3GNTL1Q67FW5 361 aaPredicted RBP16.55■□□□□ 0.24
VPS52-214ENST00000463486 COMMD6Q7Z4G1 85 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 CLNKQ7Z7G1 428 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 HPS6Q86YV9 775 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 Q8NA96 180 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 CNDP1Q96KN2 507 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 LMF1Q96S06 567 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 LYARQ9NX58 379 aaKnown RBP16.55■□□□□ 0.24
VPS52-214ENST00000463486 TEX10Q9NXF1 929 aaPredicted RBP16.55■□□□□ 0.24
VPS52-214ENST00000463486 MS4A12Q9NXJ0 267 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 VPS29Q9UBQ0 182 aa16.55■□□□□ 0.24
VPS52-214ENST00000463486 VTI1BQ9UEU0 232 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms