RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 OR7G3Q8NG95 312 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 OR13F1Q8NGS4 319 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 GOT1L1Q8NHS2 421 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 PANX1Q96RD7 426 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ING2Q9H160 280 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CHST8Q9H2A9 424 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 DPEP2Q9H4A9 486 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CXorf21Q9HAI6 301 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ATXN10Q9UBB4 475 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ATP6V1HQ9UI12 483 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 GPR34Q9UPC5 381 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 NAALAD2Q9Y3Q0 740 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CEP295Q9C0D2 2601 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 C1orf226A1L170 272 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 RNASET2O00584 256 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 SEC14L2O76054 403 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 LRATO95237 230 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 GSNP06396 782 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CCDC159P0C7I6 412 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 RPL10P27635 214 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 GSTM2P28161 218 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 TIA1P31483 386 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 KDELR2P33947 212 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 PREPP48147 710 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 DUSP3P51452 185 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 TMBIM6P55061 237 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 VAC14Q08AM6 782 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 FOXC1Q12948 553 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 KCNAB2Q13303 367 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 PMS2P3Q13401 168 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ELOAQ14241 798 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 DEFB133Q30KQ1 61 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 PAGE2BQ5JRK9 111 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 C6orf141Q5SZD1 244 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF691Q5VV52 312 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 OR2T5Q6IEZ7 315 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CAPN13Q6MZZ7 669 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 SPESP1Q6UW49 350 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 KCTD8Q6ZWB6 473 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ANKRD46Q86W74 232 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 GKN2Q86XP6 184 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 PTOV1Q86YD1 416 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 CHDHQ8NE62 594 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 OR7A2PQ8NGA2 310 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 OR2T29Q8NH02 315 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 C12orf43Q96C57 262 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 PDXPQ96GD0 296 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 DUSP26Q9BV47 211 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 AMBRA1Q9C0C7 1298 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 BHLHE41Q9C0J9 482 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 TMEM168Q9H0V1 697 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 SOX17Q9H6I2 414 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 POLR1BQ9H9Y6 1135 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 TRNAU1APQ9NX07 287 aaKnown RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 GULP1Q9UBP9 304 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF282Q9UDV7 671 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 TMEFF2Q9UIK5 374 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-207ENST00000463477 ORC6Q9Y5N6 252 aa9.45□□□□□ -0.9
PTPRD-207ENST00000463477 LY6G6EA0A0G2JKS1 128 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 LOC100130705A0A1B0GUX0 176 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 M0QX08 132 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 VEGFDO43915 354 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 UGT2B11O75310 529 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 FPR1P21462 350 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 IDSP22304 550 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 DNAJA1P31689 397 aaKnown RBP9.44□□□□□ -0.9
PTPRD-207ENST00000463477 PCGF2P35227 344 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 BDKRB1P46663 353 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 CXCR4P61073 352 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 ISL1P61371 349 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 E2F1Q01094 437 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 KEAP1Q14145 624 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 PLCL1Q15111 1095 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 ZIK1Q3SY52 487 aaPredicted RBP9.44□□□□□ -0.9
PTPRD-207ENST00000463477 CCSMST1Q4G0I0 132 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF648Q5T619 568 aaPredicted RBP9.44□□□□□ -0.9
PTPRD-207ENST00000463477 CPTPQ5TA50 214 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 OGFOD3Q6PK18 319 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 UNC5DQ6UXZ4 953 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 TMEM26Q6ZUK4 368 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 R3HCC1LQ7Z5L2 792 aaKnown RBP9.44□□□□□ -0.9
PTPRD-207ENST00000463477 TMEM179BQ7Z7N9 219 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 LRRC56Q8IYG6 542 aaPredicted RBP9.44□□□□□ -0.9
PTPRD-207ENST00000463477 SETD9Q8NE22 299 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 OR9A1PQ8NGU1 263 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 HUS1BQ8NHY5 278 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 GPBAR1Q8TDU6 330 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 ZFP90Q8TF47 636 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF480Q8WV37 535 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 UBE2E3Q969T4 207 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 MTERF3Q96E29 417 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 MED8Q96G25 268 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 MTERF1Q99551 399 aaKnown RBP9.44□□□□□ -0.9
PTPRD-207ENST00000463477 SCNM1Q9BWG6 230 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 EBPLQ9BY08 206 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 TRIT1Q9H3H1 467 aaKnown RBP9.44□□□□□ -0.9
PTPRD-207ENST00000463477 SMURF2Q9HAU4 748 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms