RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 KRT78Q8N1N4 520 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 OR2M7Q8NG81 312 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 OR5M3Q8NGP4 307 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 CCT6BQ92526 530 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 PITHD1Q9GZP4 211 aaPredicted RBP18.37■□□□□ 0.53
VARS-221ENST00000463184 LIN28AQ9H9Z2 209 aaKnown RBP18.37■□□□□ 0.53
VARS-221ENST00000463184 OARD1Q9Y530 152 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 CLCA3PQ9Y6N3 262 aa18.37■□□□□ 0.53
VARS-221ENST00000463184 PHF3Q92576 2039 aaKnown RBP18.37■□□□□ 0.53
VARS-221ENST00000463184 A0A0G2JN53 185 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 PINLYPA6NC86 204 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 BCKDKO14874 412 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 CLEC3AO75596 197 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 WDR47O94967 919 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 GSTA2P09210 222 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 HNRNPH1P31943 449 aaKnown RBP18.36■□□□□ 0.53
VARS-221ENST00000463184 HNRNPFP52597 415 aaKnown RBP18.36■□□□□ 0.53
VARS-221ENST00000463184 RCN2Q14257 317 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 NDUFAF5Q5TEU4 345 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 TRMT10BQ6PF06 316 aaKnown RBP18.36■□□□□ 0.53
VARS-221ENST00000463184 HSDL2Q6YN16 418 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 C16orf47Q6ZP98 133 aaPredicted RBP18.36■□□□□ 0.53
VARS-221ENST00000463184 TMEM200AQ86VY9 491 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 CLYBLQ8N0X4 340 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 TMEM52Q8NDY8 209 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 DAZLQ92904 295 aaKnown RBP18.36■□□□□ 0.53
VARS-221ENST00000463184 QRFPRQ96P65 431 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 RASL10BQ96S79 203 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 FMO2Q99518 471 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 CAPS2Q9BXY5 557 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 TTTY12Q9BZ98 90 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 ZNF407Q9C0G0 2248 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 NT5DC2Q9H857 520 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 MOCS1Q9NZB8 636 aa18.36■□□□□ 0.53
VARS-221ENST00000463184 NPEPPSL1A6NEC2 478 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 FIGNL2A6NMB9 653 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 FAM166BA8MTA8 275 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 CYR61O00622 381 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 CTNSO60931 367 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 GLSO94925 669 aaPredicted RBP18.35■□□□□ 0.53
VARS-221ENST00000463184 OR6B1O95007 311 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 IGHG3P01860 377 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 IFNA16P05015 189 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 CNR1P21554 472 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 ACVR2AP27037 513 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 ECHS1P30084 290 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 SOX3P41225 446 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 NR0B1P51843 470 aaKnown RBP18.35■□□□□ 0.53
VARS-221ENST00000463184 ART1P52961 327 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 SLBPQ14493 270 aaKnown RBP eCLIP18.35■□□□□ 0.53
VARS-221ENST00000463184 TRIM40Q6P9F5 258 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 GK5Q6ZS86 529 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 CLNKQ7Z7G1 428 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 FAM47BQ8NA70 645 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 MORN4Q8NDC4 146 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 OR2L5Q8NG80 312 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 OR10Q1Q8NGQ4 319 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 SERINC2Q96SA4 455 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 SMC6Q96SB8 1091 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 FAM173AQ9BQD7 235 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 REXO4Q9GZR2 422 aaKnown RBP18.35■□□□□ 0.53
VARS-221ENST00000463184 PNPLA3Q9NST1 481 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 VTI1BQ9UEU0 232 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 DAPP1Q9UN19 280 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 SPG11Q96JI7 2443 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 DNAJC13O75165 2243 aa18.35■□□□□ 0.53
VARS-221ENST00000463184 A0A1B0GVC2 190 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 ANKDD1BA6NHY2 528 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 WWP2O00308 870 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 KLK8O60259 260 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 GDF5P43026 501 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 SLC6A12P48065 614 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 PLA2G16P53816 162 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 MTTPP55157 894 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 LIM2P55344 173 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 MGAT5Q09328 741 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 EFTUD2Q15029 972 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■■■□ 21.8
VARS-221ENST00000463184 ADPRMQ3LIE5 342 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 RTL4Q6ZR62 310 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 C3orf62Q6ZUJ4 267 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 FRA10AC1Q70Z53 315 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 CYS1Q717R9 158 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 ADAMTSL2Q86TH1 951 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 RELL1Q8IUW5 271 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 GOLM1Q8NBJ4 401 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 OR8K3Q8NH51 312 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 OR14A16Q8NHC5 309 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 RHBDF1Q96CC6 855 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 SGCZQ96LD1 299 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 TTYH2Q9BSA4 534 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 ALOXE3Q9BYJ1 711 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 IL1RL2Q9HB29 575 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 GPRC5BQ9NZH0 403 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 CTNNAL1Q9UBT7 734 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 NFU1Q9UMS0 254 aa18.34■□□□□ 0.53
VARS-221ENST00000463184 SSTR1P30872 391 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 ZFP36L2P47974 494 aaKnown RBP18.33■□□□□ 0.52
VARS-221ENST00000463184 HK2P52789 917 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 GPX6P59796 221 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 MYBPHQ13203 477 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms