RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 KCNC1P48547 511 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 ASB18Q6ZVZ8 466 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 NRROSQ86YC3 692 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 GRPEL2Q8TAA5 225 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 SLC35C2Q9NQQ7 365 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 PCDHGA10Q9Y5H3 936 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 CTSAP10619 480 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 SUOXP51687 545 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 DCDC1P59894 354 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 MLLT1Q03111 559 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-205ENST00000460170 SLC3A1Q07837 685 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 PON3Q15166 354 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 NUP54Q7Z3B4 507 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF676Q8N7Q3 588 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 CHST4Q8NCG5 386 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 FNDC8Q8TC99 324 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 TRUB1Q8WWH5 349 aaKnown RBP14.16□□□□□ -0.14
PTPRU-205ENST00000460170 PIGKQ92643 395 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 NTMT1Q9BV86 223 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 TMEM5Q9Y2B1 443 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 J3QLW9 94 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF19P17023 458 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 HRH2P25021 359 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 RPS26P62854 115 aaKnown RBP14.16□□□□□ -0.14
PTPRU-205ENST00000460170 PPP3R1P63098 170 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 RPS21P63220 83 aaKnown RBP14.16□□□□□ -0.14
PTPRU-205ENST00000460170 PGAP2Q9UHJ9 254 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 LIPT1Q9Y234 373 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 FKBP7Q9Y680 259 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 SCN7AQ01118 1682 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 ITGA10O75578 1167 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 GSTT2BP0CG30 244 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 HSF2Q03933 536 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPRU-205ENST00000460170 OR7G3Q8NG95 312 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 MAL2Q969L2 176 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 TBL1XR1Q9BZK7 514 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 OR51I1Q9H343 314 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 IFT52Q9Y366 437 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 A0A1W2PP55 124 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 GJB3O75712 270 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 SLITRK5O94991 958 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 GNALP38405 381 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 SLAMF1Q13291 335 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 TAS1R1Q7RTX1 841 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 MFSD2AQ8NA29 543 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 LGR4Q9BXB1 951 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 C14orf105Q9NVL8 296 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 KLHL33A6NCF5 533 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 GPR39O43194 453 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 CKMT1AP12532 417 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 SDC1P18827 310 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 MPP7Q5T2T1 576 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 SLC39A5Q6ZMH5 540 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 C12orf76Q8N812 135 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-205ENST00000460170 C16orf78Q8WTQ4 265 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 OR2M4Q96R27 311 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 PNO1Q9NRX1 252 aaKnown RBP14.15□□□□□ -0.14
PTPRU-205ENST00000460170 CMAHPQ9Y471 501 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 PCDHGB5Q9Y5G0 923 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 GLI3P10071 1580 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 FHP07954 510 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 ID2Q02363 134 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 ANKDD1AQ495B1 522 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 UNC5DQ6UXZ4 953 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 MAVSQ7Z434 540 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 C1orf216Q8TAB5 229 aa14.15□□□□□ -0.14
PTPRU-205ENST00000460170 HMX2A2RU54 273 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 HHLA1C9JL84 531 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 FBP2O00757 339 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 DRD2P14416 443 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 POLR2CP19387 275 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-205ENST00000460170 MASP1P48740 699 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 NFE2L1Q14494 772 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 FAM214AQ32MH5 1076 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 RUNDC3AQ59EK9 446 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 PRRT3Q5FWE3 981 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 SLC35F1Q5T1Q4 408 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 PROKR1Q8TCW9 393 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 TRIM2Q9C040 744 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 DCAF13Q9NV06 445 aaKnown RBP14.14□□□□□ -0.15
PTPRU-205ENST00000460170 CLDND1Q9NY35 253 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 CCDC59Q9P031 241 aaKnown RBP14.14□□□□□ -0.15
PTPRU-205ENST00000460170 C1orf226A1L170 272 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 DLGAP1O14490 977 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 EMC8O43402 210 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 B4GALT2O60909 372 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 F8A1P23610 371 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 CXCR1P25024 350 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 EDNRAP25101 427 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 IER5LQ5T953 404 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 TSTD1Q8NFU3 115 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 PDLIM5Q96HC4 596 aaKnown RBP14.14□□□□□ -0.15
PTPRU-205ENST00000460170 DPYSL5Q9BPU6 564 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 DPH7Q9BTV6 452 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 RMI1Q9H9A7 625 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 KLHL42Q9P2K6 505 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 COL16A1Q07092 1604 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-205ENST00000460170 IGLON5A6NGN9 336 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 ARF5P84085 180 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms