RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 RAB23Q9ULC3 237 aa12.35□□□□□ -0.43
CASC4P1-201ENST00000456608 USP34Q70CQ2 3546 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 VCANP13611 3396 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 A0A1W2PRB8 838 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 PRR33A8MZF0 331 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 TNFRSF10AO00220 468 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 CASC3O15234 703 aaKnown RBP12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 PDPK1O15530 556 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 PRKRAO75569 313 aaKnown RBP12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 CKMT1AP12532 417 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 IL1RNP18510 177 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 HTR1EP28566 365 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 GZMMP51124 257 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 LIM2P55344 173 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 HBA1P69905 142 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 C18orf63Q68DL7 685 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 TCEAL6Q6IPX3 200 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 TMEM71Q6P5X7 295 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 DBX2Q6ZNG2 339 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 CALHM3Q86XJ0 350 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 KMT5CQ86Y97 462 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 PDSS2Q86YH6 399 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 D2HGDHQ8N465 521 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 ZFP90Q8TF47 636 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 OR5P2Q8WZ92 322 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 TCEAL3Q969E4 200 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 EXOSC8Q96B26 276 aaKnown RBP12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 SLC41A2Q96JW4 573 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 ZNF583Q96ND8 569 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 KCTD14Q9BQ13 255 aaPredicted RBP12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 ECSITQ9BQ95 431 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 NUDT22Q9BRQ3 303 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 THUMPD3Q9BV44 507 aaKnown RBP12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 NPLQ9BXD5 320 aaPredicted RBP12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 ZMYND15Q9H091 742 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 KAT8Q9H7Z6 458 aaKnown RBP12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 LYRM4Q9HD34 91 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 SLAMF7Q9NQ25 335 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 TAS2R9Q9NYW1 312 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 C5AR2Q9P296 337 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 DAPP1Q9UN19 280 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 VPS4AQ9UN37 437 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 PCDHGB4Q9UN71 923 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 USP22Q9UPT9 525 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 PCDHB3Q9Y5E6 796 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 PCDHGB2Q9Y5G2 931 aa12.34□□□□□ -0.43
CASC4P1-201ENST00000456608 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 FITM1A5D6W6 292 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 CLIC1O00299 241 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 PGRMC2O15173 223 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 NVLO15381 856 aaKnown RBP12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 TOX3O15405 576 aaPredicted RBP12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 DNAJB6O75190 326 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 FKBP6O75344 327 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 KRT36O76013 467 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 MED26O95402 600 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 C1QCP02747 245 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 NR2F6P10588 404 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 GPX2P18283 190 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 CPN2P22792 545 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 OR4D2P58180 307 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 CCL7P80098 99 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 HSD11B2P80365 405 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 ABHD18Q0P651 414 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 SLC14A1Q13336 389 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 GAB1Q13480 694 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 MLC1Q15049 377 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 CEBPEQ15744 281 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 NDUFA9Q16795 377 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 INAVAQ3KP66 663 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 TCTE1Q5JU00 501 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 GARNL3Q5VVW2 1013 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 LAIR1Q6GTX8 287 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 LCN8Q6JVE9 175 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 SLC48A1Q6P1K1 146 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 AAGABQ6PD74 315 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 PRSS41Q7RTY9 318 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 IFNEQ86WN2 208 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 C10orf111Q8N326 155 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 ENDOVQ8N8Q3 282 aaKnown RBP12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 BHLHE22Q8NFJ8 381 aaPredicted RBP12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 OR10A6Q8NH74 314 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 STMN2Q93045 179 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 C10orf90Q96M02 699 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 LRRN3Q9H3W5 708 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 ZNF768Q9H5H4 540 aaKnown RBP12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 DCLRE1BQ9H816 532 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 TPT1P8Q9HAU6 139 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 RNPEPL1Q9HAU8 725 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 SLC35C2Q9NQQ7 365 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 PRDM9Q9NQV7 894 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 ACSS1Q9NUB1 689 aaPredicted RBP12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 MS4A12Q9NXJ0 267 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 ACTR3BQ9P1U1 418 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 PDP2Q9P2J9 529 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 UTS2RQ9UKP6 389 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 NAALAD2Q9Y3Q0 740 aa12.33□□□□□ -0.44
CASC4P1-201ENST00000456608 DNAH14Q0VDD8 3507 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms