RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 KCMF1Q9P0J7 381 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 CPSF2Q9P2I0 782 aaKnown RBP16.68■□□□□ 0.26
MSH6-207ENST00000456246 CLDN16Q9Y5I7 305 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 CLCA3PQ9Y6N3 262 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 H0YIV9 168 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 ZFAND5O76080 213 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 UNC5CO95185 931 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 TGFB1P01137 390 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 BIKQ13323 160 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 KRTCAP3Q53RY4 240 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 C10orf62Q5T681 223 aaPredicted RBP16.67■□□□□ 0.26
MSH6-207ENST00000456246 LGSNQ5TDP6 509 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 ZNF793Q6ZN11 406 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 GALNTL5Q7Z4T8 443 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 UBE3DQ7Z6J8 389 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 MORN4Q8NDC4 146 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 TMEM52Q8NDY8 209 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 OR14A16Q8NHC5 309 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 HUS1BQ8NHY5 278 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 THAP3Q8WTV1 239 aaPredicted RBP16.67■□□□□ 0.26
MSH6-207ENST00000456246 RELTQ969Z4 430 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 RGMAQ96B86 450 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 CSF3RQ99062 836 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 DMRT3Q9NQL9 472 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 PSD3Q9NYI0 1048 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 VTI1BQ9UEU0 232 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 PHF11Q9UIL8 331 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 UNC79Q9P2D8 2635 aa16.67■□□□□ 0.26
MSH6-207ENST00000456246 UTP20O75691 2785 aaKnown RBP16.66■□□□□ 0.26
MSH6-207ENST00000456246 CYSRT1A8MQ03 144 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 STX16-NPEPL1H3BU86 382 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 TGFBR3LH3BV60 316 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 STX16O14662 325 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 NME2P1O60361 137 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 IFNA16P05015 189 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 ABHD2P08910 425 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 NME2P22392 152 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 PTX3P26022 381 aaPredicted RBP16.66■□□□□ 0.26
MSH6-207ENST00000456246 MST1P26927 711 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 PPP2R1BP30154 601 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 GPR143P51810 404 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 CASP6P55212 293 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 KCNK10P57789 538 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 ALDH6A1Q02252 535 aaKnown RBP16.66■□□□□ 0.26
MSH6-207ENST00000456246 DDX39BQ13838 428 aaKnown RBP16.66■□□□□ 0.26
MSH6-207ENST00000456246 OR4C11Q6IEV9 310 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 MTFR2Q6P444 385 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 GOLGA7Q7Z5G4 137 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 CLNKQ7Z7G1 428 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 GPALPP1Q8IXQ4 340 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 IFT20Q8IY31 132 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 ZCCHC7Q8N3Z6 543 aaKnown RBP16.66■□□□□ 0.26
MSH6-207ENST00000456246 L3MBTL4Q8NA19 623 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 POGLUT1Q8NBL1 392 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 NCLNQ969V3 563 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 FRMD6Q96NE9 622 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 ALOXE3Q9BYJ1 711 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 OR51B5Q9H339 312 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 IPPKQ9H8X2 491 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 SUCOQ9UBS9 1254 aaKnown RBP16.66■□□□□ 0.26
MSH6-207ENST00000456246 FBXW2Q9UKT8 454 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 PPT2Q9UMR5 302 aa16.66■□□□□ 0.26
MSH6-207ENST00000456246 KLF13Q9Y2Y9 288 aaPredicted RBP16.66■□□□□ 0.26
MSH6-207ENST00000456246 A1L4Q6 167 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 RTCAO00442 366 aaKnown RBP16.65■□□□□ 0.26
MSH6-207ENST00000456246 SMIM24O75264 130 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 COX7A2P14406 83 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 CPN2P22792 545 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 TLX1P31314 330 aaPredicted RBP16.65■□□□□ 0.26
MSH6-207ENST00000456246 PMP22Q01453 160 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 CUL3Q13618 768 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 MAPKAPK3Q16644 382 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 UBAP2Q5T6F2 1119 aaKnown RBP16.65■□□□□ 0.26
MSH6-207ENST00000456246 TMEM156Q8N614 296 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 PTGR2Q8N8N7 351 aaPredicted RBP16.65■□□□□ 0.26
MSH6-207ENST00000456246 SCYL1Q96KG9 808 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 GPR137Q96N19 417 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 MAPKAP1Q9BPZ7 522 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 HES7Q9BYE0 225 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 XPR1Q9UBH6 696 aa16.65■□□□□ 0.26
MSH6-207ENST00000456246 YARS2Q9Y2Z4 477 aaKnown RBP16.65■□□□□ 0.26
MSH6-207ENST00000456246 EXOC1LA0A1B0GW35 172 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 POC1B-GALNT4F8VUJ3 575 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 FOXE1O00358 373 aaPredicted RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 DYRK3O43781 588 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 ITGA10O75578 1167 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 CLDN9O95484 217 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 SNRPAP09012 282 aaKnown RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 BUD31P41223 144 aaPredicted RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 SLAMF1Q13291 335 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 CPSF6Q16630 551 aaKnown RBP eCLIP16.64■□□□□ 0.25
MSH6-207ENST00000456246 ZNF468Q5VIY5 522 aaPredicted RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 HSDL2Q6YN16 418 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 TRMT10CQ7L0Y3 403 aaKnown RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 GPR180Q86V85 440 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 FJX1Q86VR8 437 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 CYP4Z2PQ8N1L4 340 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 PLD6Q8N2A8 252 aaKnown RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 OR8K3Q8NH51 312 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 DCAKDQ8WVC6 231 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms