RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TMEM214Q6NUQ4 689 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 SLC48A1Q6P1K1 146 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 CBLL1Q75N03 491 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 VN1R4Q7Z5H5 301 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 SPRED1Q7Z699 444 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 SPPL2CQ8IUH8 684 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 PLXDC1Q8IUK5 500 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 ZZZ3Q8IYH5 903 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 ARL14Q8N4G2 192 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 FBXL6Q8N531 539 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 ARL10Q8N8L6 244 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 HIPK4Q8NE63 616 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 UTP15Q8TED0 518 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 FAM162AQ96A26 154 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 EME1Q96AY2 570 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 ERLEC1Q96DZ1 483 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 ZNF597Q96LX8 424 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 HSPA12BQ96MM6 686 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 ZNF347Q96SE7 839 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 PELOQ9BRX2 385 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 INPP5KQ9BT40 448 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 RPF2Q9H7B2 306 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 TRIM45Q9H8W5 580 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 C3orf14Q9HBI5 128 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 NLGN3Q9NZ94 848 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 IFT80Q9P2H3 777 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 PNMA8BQ9ULN7 279 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 PLCL2Q9UPR0 1127 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 ENTPD4Q9Y227 616 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 LIPT1Q9Y234 373 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 CA5BQ9Y2D0 317 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 ZNF780BQ9Y6R6 833 aa6.49□□□□□ -1.37
ECHDC1-210ENST00000454859 EYSQ5T1H1 3165 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 GSAPA4D1B5 854 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 FITM1A5D6W6 292 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 DUXAA6NLW8 204 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 PLOD2O00469 737 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 STK25O00506 426 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 YY2O15391 372 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 CLOCKO15516 846 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 RASAL1O95294 804 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 PROS1P07225 676 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 FHP07954 510 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 ARAFP10398 606 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 NR2F6P10588 404 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 GLB1P16278 677 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 ALOX12P18054 663 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 KDELR2P33947 212 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 HBA1P69905 142 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 PSPHP78330 225 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 MEF2AQ02078 507 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 SLAMF1Q13291 335 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 ZSWIM7Q19AV6 140 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 PMS2CLQ68D20 193 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 WDR74Q6RFH5 385 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 USP53Q70EK8 1073 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 HIPK1Q86Z02 1210 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 MARVELD2Q8N4S9 558 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 RNF148Q8N7C7 305 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 C19orf47Q8N9M1 422 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 FAM181AQ8N9Y4 354 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 OR10G6Q8NH81 332 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 CCL4L1Q8NHW4 92 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 PPWD1Q96BP3 646 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 MIEF2Q96C03 454 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 SDCCAG3Q96C92 435 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 LOXL4Q96JB6 756 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 TEFMQ96QE5 360 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 SLC38A3Q99624 504 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 PKP2Q99959 881 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 SLC35A5Q9BS91 424 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 BTBD2Q9BX70 525 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 YTHDF1Q9BYJ9 559 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 TPSD1Q9BZJ3 242 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 IL1RAPQ9NPH3 570 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 USE1Q9NZ43 259 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 PTGFRNQ9P2B2 879 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 CIDEBQ9UHD4 219 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 CES1P1Q9UKY3 287 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 FAF1Q9UNN5 650 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 A0A087WV62 115 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 FEZF1A0PJY2 475 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 C9JVG2 144 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 H0YAE9 185 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 LAMTOR5O43504 91 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 TMPRSS11DO60235 418 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 SORBS2O94875 1100 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 CPSF4O95639 269 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 AK1P00568 194 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 C9P02748 559 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 CYC1P08574 325 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 POLR2CP19387 275 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 CHI3L1P36222 383 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 CDKN2CP42773 168 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 KHKP50053 298 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 ARHGDIAP52565 204 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 MED21Q13503 144 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 PRTGQ2VWP7 1150 aa6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 ZCCHC8Q6NZY4 707 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-210ENST00000454859 IZUMO2Q6UXV1 221 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms