RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 OR5T3Q8NGG3 340 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 OR51Q1Q8NH59 317 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 TBC1D20Q96BZ9 403 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 COQ8BQ96D53 544 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 CLIP3Q96DZ5 547 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 EGLN2Q96KS0 407 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 TSSK3Q96PN8 268 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 LRRC37BQ96QE4 947 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 CCDC106Q9BWC9 280 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 ULBP3Q9BZM4 244 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 SLC7A5P2Q9GIP4 190 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 REEP4Q9H6H4 257 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 WDR54Q9H977 334 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 ASCL3Q9NQ33 180 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 TEX10Q9NXF1 929 aaPredicted RBP10.62□□□□□ -0.71
TRAF4-206ENST00000454852 BAIAP2L1Q9UHR4 511 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 CES1P1Q9UKY3 287 aa10.62□□□□□ -0.71
TRAF4-206ENST00000454852 FAM234BA2RU67 622 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 SYNDIG1LA6NDD5 238 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 ZNF860A6NHJ4 632 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 CAPN14A8MX76 684 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 PSMD12O00232 456 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 SLC22A3O75751 556 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 TNFSF15O95150 251 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 KLK3P07288 261 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 FHP07954 510 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 NR2F6P10588 404 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 NCF2P19878 526 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 CPN2P22792 545 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 TLX1P31314 330 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 HPCAL1P37235 193 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 OR1D4P47884 311 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 HSD17B7P56937 341 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 UFM1P61960 85 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 IGLV3-21P80748 117 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 SRSF11Q05519 484 aaKnown RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 C2orf80Q0P641 193 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 SF3A3Q12874 501 aaKnown RBP eCLIP10.61□□□□□ -0.711e-6■■■□□ 15.4
TRAF4-206ENST00000454852 KLF10Q13118 480 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 BIKQ13323 160 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 RCAN2Q14206 197 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 RPS6KA2Q15349 733 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 UGT8Q16880 541 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 ARHGAP40Q5TG30 622 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 OR52E8Q6IFG1 317 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 SLC48A1Q6P1K1 146 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 BLOC1S3Q6QNY0 202 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 MSANTD1Q6ZTZ1 278 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 OVCH1Q7RTY7 1134 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 ESX1Q8N693 406 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 TANKQ92844 425 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 DPY30Q9C005 99 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 WDR41Q9HAD4 459 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 SLC52A3Q9NQ40 469 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 LANCL2Q9NS86 450 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 C14orf105Q9NVL8 296 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 FOXJ2Q9P0K8 574 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 ZNF282Q9UDV7 671 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 NDOR1Q9UHB4 597 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 NXT1Q9UKK6 140 aaKnown RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 MRPS33Q9Y291 106 aaKnown RBP10.61□□□□□ -0.71
TRAF4-206ENST00000454852 MMACHCQ9Y4U1 282 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 NEUROG3Q9Y4Z2 214 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 NUP210LQ5VU65 1888 aa10.61□□□□□ -0.71
TRAF4-206ENST00000454852 GABRR3A8MPY1 467 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 CTNSO60931 367 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 BMP10O95393 424 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 IL6P05231 212 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 RAB40ALP0C0E4 278 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 IL12AP29459 219 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 RBMS1P29558 406 aaKnown RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 PRDX6P30041 224 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 PPP2R1BP30154 601 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 SLC5A2P31639 672 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 FRKP42685 505 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 XCR1P46094 333 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 OLR1P78380 273 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 SHC2P98077 582 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 MAT1AQ00266 395 aaKnown RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 LRRC74AQ0VAA2 488 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 UBAP2LQ14157 1087 aaKnown RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 COQ5Q5HYK3 327 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 C1orf189Q5VU69 101 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 CPZQ66K79 652 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 C18orf63Q68DL7 685 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 PAOXQ6QHF9 649 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 FAM198BQ6UWH4 519 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 C6orf15Q6UXA7 325 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 QSOX2Q6ZRP7 698 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 TIPARPQ7Z3E1 657 aaKnown RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 DTX1Q86Y01 620 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 ZC3H7AQ8IWR0 971 aaKnown RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 SCUBE1Q8IWY4 988 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 SAMD14Q8IZD0 417 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 KRTCAP2Q8N6L1 136 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 FITM2Q8N6M3 262 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 EFCAB3Q8N7B9 438 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 DNAJB14Q8TBM8 379 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms