RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ABCA12Q86UK0 2595 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 EML6Q6ZMW3 1958 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 CCDC189A1A4V9 331 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 TGFBR3LH3BV60 316 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 RTCAO00442 366 aaKnown RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 ASNA1O43681 348 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 WISP2O76076 250 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ESRRAP11474 423 aaPredicted RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 MTHFD2P13995 350 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 TNNI3P19429 210 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 HIST1H1TP22492 207 aaPredicted RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 SSR2P43308 183 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 SERPINB8P50452 374 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 SSR4P51571 173 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 DDX39BQ13838 428 aaKnown RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 E2F2Q14209 437 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ACAP2Q15057 778 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 PFKFB4Q16877 469 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 GRHL2Q6ISB3 625 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 CYP4Z2PQ8N1L4 340 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 CPSF7Q8N684 471 aaKnown RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 OR7G3Q8NG95 312 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 CCDC120Q96HB5 630 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 TSPYL1Q9H0U9 437 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 VTI1BQ9UEU0 232 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ADGRE2Q9UHX3 823 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 KLF13Q9Y2Y9 288 aaPredicted RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 YARS2Q9Y2Z4 477 aaKnown RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 A0A096LPK6 155 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 PRSS44E7EML9 344 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 KLRC4-KLRK1H3BQV0 150 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 SAP18O00422 153 aaKnown RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 LDB3O75112 727 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 KLHL2O95198 593 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 CPN2P22792 545 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ATP5A1P25705 553 aaKnown RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 RAP1GDS1P52306 607 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 PCDH1Q08174 1060 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 SERTAD2Q14140 314 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 NAA30Q147X3 362 aaPredicted RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 SETDB1Q15047 1291 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 WHAMMP3Q1A5X7 153 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 KHDRBS2Q5VWX1 349 aaKnown RBP12.01□□□□□ -0.49
CHD3-206ENST00000452447 RPTNQ6XPR3 784 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ZNF793Q6ZN11 406 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 UBE3DQ7Z6J8 389 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 MRGPRGQ86SM5 289 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ZNF227Q86WZ6 799 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 SPPL2CQ8IUH8 684 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 GHDCQ8N2G8 530 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 POGLUT1Q8NBL1 392 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 C7orf57Q8NEG2 295 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 OR14A16Q8NHC5 309 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 HUS1BQ8NHY5 278 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ZNF592Q92610 1267 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 MAPKAP1Q9BPZ7 522 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 VPS11Q9H270 941 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ACSS3Q9H6R3 686 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ACTR8Q9H981 624 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 KCMF1Q9P0J7 381 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 TINAGQ9UJW2 476 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ERVK-11Q9UQG0 969 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 ENTPD4Q9Y227 616 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 PCDHGA11Q9Y5H2 935 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 IKBKGQ9Y6K9 419 aa12.01□□□□□ -0.49
CHD3-206ENST00000452447 LRBAP50851 2863 aa12□□□□□ -0.49
CHD3-206ENST00000452447 MYOCOSA0A1B0GUC4 107 aa12□□□□□ -0.49
CHD3-206ENST00000452447 HMX2A2RU54 273 aa12□□□□□ -0.49
CHD3-206ENST00000452447 A8MVJ9 347 aa12□□□□□ -0.49
CHD3-206ENST00000452447 TFECO14948 347 aaPredicted RBP12□□□□□ -0.49
CHD3-206ENST00000452447 HNRNPRO43390 633 aaKnown RBP12□□□□□ -0.49
CHD3-206ENST00000452447 INHBAP08476 426 aa12□□□□□ -0.49
CHD3-206ENST00000452447 ABOP16442 354 aa12□□□□□ -0.49
CHD3-206ENST00000452447 GPR143P51810 404 aa12□□□□□ -0.49
CHD3-206ENST00000452447 ALDH18A1P54886 795 aaKnown RBP12□□□□□ -0.49
CHD3-206ENST00000452447 PHEXP78562 749 aa12□□□□□ -0.49
CHD3-206ENST00000452447 ART3Q13508 389 aa12□□□□□ -0.49
CHD3-206ENST00000452447 C3AR1Q16581 482 aa12□□□□□ -0.49
CHD3-206ENST00000452447 DEPDC1Q5TB30 811 aa12□□□□□ -0.49
CHD3-206ENST00000452447 LIPJQ5W064 366 aa12□□□□□ -0.49
CHD3-206ENST00000452447 SP5Q6BEB4 398 aaPredicted RBP12□□□□□ -0.49
CHD3-206ENST00000452447 OR4C11Q6IEV9 310 aa12□□□□□ -0.49
CHD3-206ENST00000452447 HSDL2Q6YN16 418 aa12□□□□□ -0.49
CHD3-206ENST00000452447 SIAH3Q8IW03 269 aa12□□□□□ -0.49
CHD3-206ENST00000452447 SULF2Q8IWU5 870 aa12□□□□□ -0.49
CHD3-206ENST00000452447 ZNF808Q8N4W9 903 aaPredicted RBP12□□□□□ -0.49
CHD3-206ENST00000452447 MORN4Q8NDC4 146 aa12□□□□□ -0.49
CHD3-206ENST00000452447 ITLN2Q8WWU7 325 aaPredicted RBP12□□□□□ -0.49
CHD3-206ENST00000452447 RGMAQ96B86 450 aa12□□□□□ -0.49
CHD3-206ENST00000452447 REPS1Q96D71 796 aa12□□□□□ -0.49
CHD3-206ENST00000452447 MTERF1Q99551 399 aaKnown RBP12□□□□□ -0.49
CHD3-206ENST00000452447 OR8D2Q9GZM6 311 aa12□□□□□ -0.49
CHD3-206ENST00000452447 OR51B5Q9H339 312 aa12□□□□□ -0.49
CHD3-206ENST00000452447 TIMMDC1Q9NPL8 285 aa12□□□□□ -0.49
CHD3-206ENST00000452447 HPF1Q9NWY4 346 aa12□□□□□ -0.49
CHD3-206ENST00000452447 MS4A12Q9NXJ0 267 aa12□□□□□ -0.49
CHD3-206ENST00000452447 NINJ2Q9NZG7 142 aa12□□□□□ -0.49
CHD3-206ENST00000452447 ZNF223Q9UK11 482 aaPredicted RBP12□□□□□ -0.49
CHD3-206ENST00000452447 TNPO3Q9Y5L0 923 aaKnown RBP12□□□□□ -0.49
CHD3-206ENST00000452447 NCOA6Q14686 2063 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms