RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 CLDN16Q9Y5I7 305 aa9.94□□□□□ -0.82
RPE-214ENST00000452025 COMMD10Q9Y6G5 202 aa9.94□□□□□ -0.82
RPE-214ENST00000452025 CHD3Q12873 2000 aaKnown RBP9.94□□□□□ -0.82
RPE-214ENST00000452025 EXPH5Q8NEV8 1989 aa9.94□□□□□ -0.82
RPE-214ENST00000452025 INAFM1C9JVW0 142 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 ERI3O43414 337 aaKnown RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 ZNF354AO60765 605 aaPredicted RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 LRATO95237 230 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 GUCA1CO95843 209 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 SMIM10L1P0DMW3 83 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 EPXP11678 715 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 RAB38P57729 211 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 KCNJ2P63252 427 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 PPP2R2BQ00005 443 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 CDK16Q00536 496 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 SIX1Q15475 284 aaPredicted RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 TRIP13Q15645 432 aaPredicted RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 FBXL19-AS1Q494R0 122 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 ANKRD22Q5VYY1 191 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 DUPD1Q68J44 220 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 TMEM132CQ8N3T6 1108 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 TRPV3Q8NET8 790 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 CCT6BQ92526 530 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 GAL3ST3Q96A11 431 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 SMIM10Q96HG1 83 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 FAR2Q96K12 515 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 RUNDC3BQ96NL0 473 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 AIF1LQ9BQI0 150 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 DESI2Q9BSY9 194 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 TRIM5Q9C035 493 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 TSPY26PQ9H489 355 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 PELI2Q9HAT8 420 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 CLK4Q9HAZ1 481 aaKnown RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 HOMER3Q9NSC5 361 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 C20orf96Q9NUD7 363 aaPredicted RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 BOKQ9UMX3 212 aaPredicted RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 MRPS33Q9Y291 106 aaKnown RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 DYRK1BQ9Y463 629 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 CLCA3PQ9Y6N3 262 aa9.93□□□□□ -0.82
RPE-214ENST00000452025 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 FBN1P35555 2871 aaKnown RBP9.93□□□□□ -0.82
RPE-214ENST00000452025 C15orf38-AP3S2A0A0A6YYH1 394 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 ZCWPW2A0A1B0GU75 182 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 A0A1W2PPR1 153 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 LRRC3CA6NJW4 275 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 CLDN4O14493 209 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 HAUS5O94927 633 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 HRGP04196 525 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 SERPINA6P08185 405 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 HIST1H2AGP0C0S8 130 aaPredicted RBP9.92□□□□□ -0.82
RPE-214ENST00000452025 RFPL3SP0C7P2 107 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 HIST1H2ADP20671 130 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 KCNJ1P48048 391 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 ZNF136P52737 540 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 HSD17B7P56937 341 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 STXBP1P61764 594 aaKnown RBP9.92□□□□□ -0.82
RPE-214ENST00000452025 TIAL1Q01085 375 aaKnown RBP eCLIP9.92□□□□□ -0.82
RPE-214ENST00000452025 RUNX2Q13950 521 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 HYAL4Q2M3T9 481 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 RBM20Q5T481 1227 aaKnown RBP9.92□□□□□ -0.82
RPE-214ENST00000452025 UGT3A1Q6NUS8 523 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 PAQR3Q6TCH7 311 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 OPN5Q6U736 354 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 C4orf22Q6V702 233 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 MAATS1Q7Z4T9 603 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 CXorf67Q86X51 503 aaPredicted RBP9.92□□□□□ -0.82
RPE-214ENST00000452025 KIF18BQ86Y91 864 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 P3H2Q8IVL5 708 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 OR14A16Q8NHC5 309 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 SPATA3Q8NHX4 192 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 NEIL3Q8TAT5 605 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 SLC2A12Q8TD20 617 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 DAZLQ92904 295 aaKnown RBP9.92□□□□□ -0.82
RPE-214ENST00000452025 HSPBAP1Q96EW2 488 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 HIST1H2AHQ96KK5 128 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 Q96MF0 132 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 JSRP1Q96MG2 331 aaPredicted RBP9.92□□□□□ -0.82
RPE-214ENST00000452025 HIST1H2AJQ99878 128 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 FAM167BQ9BTA0 163 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 H2AFJQ9BTM1 129 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 FOXD3Q9UJU5 478 aaPredicted RBP9.92□□□□□ -0.82
RPE-214ENST00000452025 FBXO5Q9UKT4 447 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 MED12Q93074 2177 aa9.92□□□□□ -0.82
RPE-214ENST00000452025 SONP18583 2426 aaKnown RBP9.91□□□□□ -0.82
RPE-214ENST00000452025 GOLGA8MH3BSY2 632 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 ARHGEF9O43307 516 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 B3GALT2O43825 422 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 GDF1P27539 372 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 CERS1P27544 350 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 HNRNPH1P31943 449 aaKnown RBP9.91□□□□□ -0.82
RPE-214ENST00000452025 AGFG1P52594 562 aaKnown RBP9.91□□□□□ -0.82
RPE-214ENST00000452025 PGGT1BP53609 377 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 CDKN2DP55273 166 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 AP1S2P56377 157 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 RNF4P78317 190 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 SORDQ00796 357 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 ID2Q02363 134 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 ASPHQ12797 758 aa9.91□□□□□ -0.82
RPE-214ENST00000452025 KIF5AQ12840 1032 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms