RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MFSD4BQ5TF39 518 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 TMEM214Q6NUQ4 689 aaKnown RBP16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 NDUFAF7Q7L592 441 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 C10orf67Q8IYJ2 551 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 CDYL2Q8N8U2 506 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 TTLQ8NG68 377 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 CDK15Q96Q40 435 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 TGIF2Q9GZN2 237 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 RASSF4Q9H2L5 321 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 SPNS1Q9H2V7 528 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 ASF1BQ9NVP2 202 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 ADGRE2Q9UHX3 823 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 RNF11Q9Y3C5 154 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 TRAF6Q9Y4K3 522 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 ESPL1Q14674 2120 aa16.07■□□□□ 0.16
PRPF40A-204ENST00000450303 RELNP78509 3460 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 PRRC2CQ9Y520 2896 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 CLEC18AA5D8T8 446 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 ANKDD1BA6NHY2 528 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 H0YIG0 161 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 PPP6CO00743 305 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 UBFD1O14562 309 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 BMP10O95393 424 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 NSA2O95478 260 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 B3GALT4O96024 378 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 TROVE2P10155 538 aaKnown RBP eCLIP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 VARSP26640 1264 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 GSTM2P28161 218 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 SERPINB1P30740 379 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF33BQ06732 778 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 MRPL49Q13405 166 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 RBBP5Q15291 538 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 CPSF6Q16630 551 aaKnown RBP eCLIP16.06■□□□□ 0.161e-15■■■■□ 19.8
PRPF40A-204ENST00000450303 MINDY4Q4G0A6 757 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 LETMD1Q6P1Q0 360 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 CLEC18BQ6UXF7 455 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 TMIGD1Q6UXZ0 262 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 Q6ZS92 163 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 PDSS2Q86YH6 399 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 WDR75Q8IWA0 830 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 KBTBD2Q8IY47 623 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 FAM26EQ8N5C1 309 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 CLEC18CQ8NCF0 446 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 OR51Q1Q8NH59 317 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 DNAJB14Q8TBM8 379 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 CCT6BQ92526 530 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 SORT1Q99523 831 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 WDR77Q9BQA1 342 aaPredicted RBP16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 ELOVL6Q9H5J4 265 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 ANKHQ9HCJ1 492 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 PTGFRNQ9P2B2 879 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 ZDHHC2Q9UIJ5 367 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 HAO1Q9UJM8 370 aa16.06■□□□□ 0.16
PRPF40A-204ENST00000450303 IGHV1-45A0A0A0MS14 117 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 IGHV3-20A0A0C4DH32 117 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF860A6NHJ4 632 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 H0YIV9 168 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 RDH16O75452 317 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 PRR35P0CG20 571 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 PCNAP12004 261 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 XCR1P46094 333 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 PCOLCEQ15113 449 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 ZRSR2Q15696 482 aaKnown RBP16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 EIF2S3LQ2VIR3 472 aaKnown RBP16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 CES4AQ5XG92 561 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 IGFL2Q6UWQ7 119 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 ISLR2Q6UXK2 745 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 FAM47EQ6ZV65 393 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 TRPM8Q7Z2W7 1104 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 SIRT6Q8N6T7 355 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF781Q8N8C0 355 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 CATSPER1Q8NEC5 780 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 PIWIL2Q8TC59 973 aaKnown RBP16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 BRIX1Q8TDN6 353 aaKnown RBP16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 SARGQ9BW04 601 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 RBCK1Q9BYM8 510 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 C20orf27Q9GZN8 174 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 VN1R1Q9GZP7 353 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 EPS8L2Q9H6S3 715 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF395Q9H8N7 513 aaPredicted RBP16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 VTI1BQ9UEU0 232 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 NTNG1Q9Y2I2 539 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 FIS1Q9Y3D6 152 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 NAALAD2Q9Y3Q0 740 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 TSC22D4Q9Y3Q8 395 aa16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 COPG1Q9Y678 874 aaKnown RBP16.05■□□□□ 0.16
PRPF40A-204ENST00000450303 PTPN13Q12923 2485 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 NDUFS4O43181 175 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 PRAMEF4O60810 478 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 EDF1O60869 148 aaKnown RBP16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 DNAJB6O75190 326 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 ULK1O75385 1050 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 SLC35G6P0C7Q6 338 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 C8orf89P0DMQ9 161 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 ARRB2P32121 409 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 AHRP35869 848 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 ACTN3Q08043 901 aaPredicted RBP16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 NR6A1Q15406 480 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 CRB2Q5IJ48 1285 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 PRAMEF9Q5VWM5 478 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms