RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 C1QTNF3Q9BXJ4 246 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 ELOVL6Q9H5J4 265 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 EPS8L2Q9H6S3 715 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 PRDM9Q9NQV7 894 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 C5AR2Q9P296 337 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 MID2Q9UJV3 735 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 GRID1Q9ULK0 1009 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 DAPP1Q9UN19 280 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 DOCK10Q96BY6 2186 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 SCN3AQ9NY46 2000 aa13.68□□□□□ -0.22
USP39-206ENST00000448971 ANKRD17O75179 2603 aaKnown RBP13.67□□□□□ -0.22
USP39-206ENST00000448971 FAM227AF5H4B4 570 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 SERPINA7P05543 415 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 CELA2AP08217 269 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 PRR35P0CG20 571 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 MAOAP21397 527 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 HIST1H1TP22492 207 aaPredicted RBP13.67□□□□□ -0.22
USP39-206ENST00000448971 NEK2P51955 445 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 LIM2P55344 173 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 BTG2P78543 158 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 SLC13A2Q13183 592 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 FRG2Q64ET8 278 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 ZYG11AQ6WRX3 759 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 ZNF793Q6ZN11 406 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 SRRM1Q8IYB3 904 aaKnown RBP13.67□□□□□ -0.22
USP39-206ENST00000448971 MREGQ8N565 214 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 CISD2Q8N5K1 135 aaKnown RBP13.67□□□□□ -0.22
USP39-206ENST00000448971 SIRT6Q8N6T7 355 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 PLPP5Q8NEB5 264 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 WDR20Q8TBZ3 569 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 BRIX1Q8TDN6 353 aaKnown RBP13.67□□□□□ -0.22
USP39-206ENST00000448971 RGMAQ96B86 450 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 CCDC126Q96EE4 140 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 APOPT1Q96IL0 206 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 FRG2BQ96QU4 278 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 SORBS1Q9BX66 1292 aaKnown RBP13.67□□□□□ -0.22
USP39-206ENST00000448971 PRTFDC1Q9NRG1 225 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 PTGFRNQ9P2B2 879 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 MAP10Q9P2G4 905 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 TRPS1Q9UHF7 1281 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 RAB21Q9UL25 225 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 EMCNQ9ULC0 261 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 STK38LQ9Y2H1 464 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 TSC22D4Q9Y3Q8 395 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 MMACHCQ9Y4U1 282 aa13.67□□□□□ -0.22
USP39-206ENST00000448971 CLDN4O14493 209 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 PLPP1O14494 284 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 PLIN3O60664 434 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 OR4F21O95013 312 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 PROCP04070 461 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 TUBBP07437 444 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 ICAM2P13598 275 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
USP39-206ENST00000448971 CRHR1P34998 444 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 TSFMP43897 325 aaKnown RBP13.66□□□□□ -0.22
USP39-206ENST00000448971 PRKAA2P54646 552 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 KRT71Q3SY84 523 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 UNC50Q53HI1 259 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 SGO1Q5FBB7 561 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 DEPDC1Q5TB30 811 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 LETMD1Q6P1Q0 360 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 IGFL3Q6UXB1 125 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 LINC00696Q6ZRV3 163 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 RIPOR1Q6ZS17 1223 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 UBE3DQ7Z6J8 389 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 CLNKQ7Z7G1 428 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 NUDT13Q86X67 352 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 IQCKQ8N0W5 287 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 ZADH2Q8N4Q0 377 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 CCNYL1Q8N7R7 359 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 ACOT4Q8N9L9 421 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 MTFMTQ96DP5 389 aaKnown RBP13.66□□□□□ -0.22
USP39-206ENST00000448971 L3HYPDHQ96EM0 354 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 SERPINI1Q99574 410 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 REPIN1Q9BWE0 567 aaKnown RBP13.66□□□□□ -0.22
USP39-206ENST00000448971 ROPN1BQ9BZX4 212 aaPredicted RBP13.66□□□□□ -0.22
USP39-206ENST00000448971 ROPN1Q9HAT0 212 aaPredicted RBP13.66□□□□□ -0.22
USP39-206ENST00000448971 LYRM4Q9HD34 91 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 PRDM7Q9NQW5 492 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 LGALS13Q9UHV8 139 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 FBXW2Q9UKT8 454 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 SNX6Q9UNH7 406 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 SLC5A6Q9Y289 635 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 B3GNT3Q9Y2A9 372 aa13.66□□□□□ -0.22
USP39-206ENST00000448971 A0A1B0GTL3 188 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 PPP6CO00743 305 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 SCELO95171 688 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 MLYCDO95822 493 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 ITGAMP11215 1152 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 IMPDH1P20839 514 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 CPN2P22792 545 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 PTX3P26022 381 aaPredicted RBP13.65□□□□□ -0.22
USP39-206ENST00000448971 HMOX2P30519 316 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 HNRNPFP52597 415 aaKnown RBP13.65□□□□□ -0.22
USP39-206ENST00000448971 HSD17B7P56937 341 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 LCP2Q13094 533 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 EXT1Q16394 746 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 C10orf62Q5T681 223 aaPredicted RBP13.65□□□□□ -0.22
USP39-206ENST00000448971 C1QL3Q5VWW1 255 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 PLAG1Q6DJT9 500 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms