RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 FER1L5A0AVI2 2057 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 MDC1Q14676 2089 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 MED13Q9UHV7 2174 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 BAHCC1Q9P281 2608 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 KCNE1BA0A087WTH5 132 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 CTSVO60911 334 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 C1QL1O75973 258 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 APOL3O95236 402 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 TSPAN12O95859 305 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 CYC1P08574 325 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 PRKAR1AP10644 381 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 FDXRP22570 491 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 MCM3P25205 808 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 IMPA1P29218 277 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 APOBEC3AP31941 199 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 CDKL1Q00532 357 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 TIAL1Q01085 375 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 FAM53BQ14153 422 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 LY6DQ14210 128 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 ERV3-1Q14264 604 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 PRTGQ2VWP7 1150 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 DEFB109BQ30KR1 87 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 CCSMST1Q4G0I0 132 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 ICE2Q659A1 982 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 FCRL6Q6DN72 434 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 ZNF425Q6IV72 752 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 NIPAL1Q6NVV3 410 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 PIWIL4Q7Z3Z4 852 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 PAQR7Q86WK9 346 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 C17orf64Q86WR6 236 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 ZBED8Q8IZ13 594 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 TBC1D19Q8N5T2 526 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 ENDOVQ8N8Q3 282 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 GLB1L3Q8NCI6 653 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 PIK3C3Q8NEB9 887 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 OR2Y1Q8NGV0 311 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 C9orf43Q8TAL5 461 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 EEF1AKMT1Q8WVE0 214 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 RERGQ96A58 199 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 PTERQ96BW5 349 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 FAM136AQ96C01 138 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 FBXL8Q96CD0 374 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 CFAP36Q96G28 342 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 FER1L6-AS2Q96M78 137 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 NRTNQ99748 197 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 CPNE1Q99829 537 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 WDR83Q9BRX9 315 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 DPH7Q9BTV6 452 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 SARGQ9BW04 601 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 SPRTNQ9H040 489 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 PRDM13Q9H4Q3 707 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 SAYSD1Q9NPB0 183 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 CUTCQ9NTM9 273 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 IRAK4Q9NWZ3 460 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 GRHL1Q9NZI5 618 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 ANAPC2Q9UJX6 822 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 RUVBL2Q9Y230 463 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 PDE10AQ9Y233 779 aa7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 HEMK1Q9Y5R4 338 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-206ENST00000447024 MYO18BQ8IUG5 2567 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 FAM159BA6NKW6 160 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 PEX12O00623 359 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 BANF1O75531 89 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 KLF7O75840 302 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 URI1O94763 535 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 SYF2O95926 243 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 STX2P32856 288 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 GP5P40197 560 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 SLC26A3P40879 764 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 FOLR3P41439 243 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 HNMTP50135 292 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 SLC12A2P55011 1212 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 PLTPP55058 493 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 CDKN2DP55273 166 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 RPS15AP62244 130 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 CYP4F2P78329 520 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 CUL1Q13616 776 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 FASTKQ14296 549 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 NDUFA9Q16795 377 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 PTCHD3Q3KNS1 767 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 LACTB2Q53H82 288 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 WASHC2DQ5SRD0 308 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 THEMIS2Q5TEJ8 643 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 CAPN13Q6MZZ7 669 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 C8orf74Q6P047 294 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 FAM199XQ6PEV8 388 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 LCTLQ6UWM7 567 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 C3orf62Q6ZUJ4 267 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 STRA8Q7Z7C7 330 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 ADAMTSL2Q86TH1 951 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 MMGT1Q8N4V1 131 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 C2orf73Q8N5S3 287 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 ABHD11Q8NFV4 315 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 KIF18AQ8NI77 898 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 FBXO25Q8TCJ0 367 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 LINGO1Q96FE5 620 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 C16orf45Q96MC5 204 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 NDNQ99608 321 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 DERL2Q9GZP9 239 aa7.36□□□□□ -1.23
SMARCE1-206ENST00000447024 POFUT1Q9H488 388 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms