RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 HS3ST3A1Q9Y663 406 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 NINQ8N4C6 2090 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 TRIM64CA6NLI5 447 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 VILLO15195 856 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 MITFO75030 526 aaPredicted RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 ELK4P28324 431 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 TUBA4AP68366 448 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 ZNF630Q2M218 657 aaPredicted RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 PRRT3Q5FWE3 981 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 CCDC80Q76M96 950 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 ABI3BPQ7Z7G0 1075 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 PAQR7Q86WK9 346 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 NATD1Q8N6N6 113 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 MFSD9Q8NBP5 474 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 FCRL4Q96PJ5 515 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 PRO3102Q9H379 93 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 TCEAL2Q9H3H9 227 aaPredicted RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 NEUROD4Q9HD90 331 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 APOBEC3BQ9UH17 382 aaKnown RBP16.57■□□□□ 0.24
SMC6-206ENST00000446852 SNX7Q9UNH6 387 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 PADI2Q9Y2J8 665 aa16.57■□□□□ 0.24
SMC6-206ENST00000446852 IGLV3-19P01714 112 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 ETS2P15036 469 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 HIST1H1TP22492 207 aaPredicted RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 GSTM2P28161 218 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 DNAJA1P31689 397 aaKnown RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 POLR2IP36954 125 aaKnown RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 YAP1P46937 504 aaKnown RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 ALDH3B2P48448 385 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 PCBP3P57721 371 aaKnown RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 DSTNP60981 165 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 EPS8Q12929 822 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 TTC23Q5W5X9 447 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 HORMAD2Q8N7B1 307 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 ACOT4Q8N9L9 421 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 OR2L5Q8NG80 312 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 ZFP28Q8NHY6 868 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 PATE1Q8WXA2 126 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 TOE1Q96GM8 510 aaKnown RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 KCNC2Q96PR1 638 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 TAS2R7Q9NYW3 318 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 C3orf18Q9UK00 162 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 SAMHD1Q9Y3Z3 626 aaKnown RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 ASB4Q9Y574 426 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 GON4LQ3T8J9 2241 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 GLOD5A6NK44 160 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 M0QX08 132 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 FPR1P21462 350 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 ATP5A1P25705 553 aaKnown RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 DAPP51397 102 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 SLAMF1Q13291 335 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 CEACAM20Q6UY09 585 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 TRIM73Q86UV7 250 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 TMIGD2Q96BF3 282 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 ZBED6CLQ96FA7 236 aaPredicted RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 PHF7Q9BWX1 381 aaPredicted RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 POLMQ9NP87 494 aaPredicted RBP16.56■□□□□ 0.24
SMC6-206ENST00000446852 ATG4BQ9Y4P1 393 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 PCDHGA8Q9Y5G5 932 aa16.56■□□□□ 0.24
SMC6-206ENST00000446852 PRAMEF25A6NGN4 478 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 PRAMEF26H0Y7S4 382 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 BMP10O95393 424 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 DRD2P14416 443 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 IGFBP5P24593 272 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 CERS1P27544 350 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 PEX19P40855 299 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 RAB8AP61006 207 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 GPR18Q14330 331 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 SLC9A5Q14940 896 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 TJAP1Q5JTD0 557 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 COL13A1Q5TAT6 717 aaPredicted RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 MRM1Q6IN84 353 aaKnown RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 TNFAIP8L2Q6P589 184 aaPredicted RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 VN1R4Q7Z5H5 301 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 GALNT5Q7Z7M9 940 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 SFTPA2Q8IWL1 248 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 TBC1D19Q8N5T2 526 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 ZNF555Q8NEP9 628 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 SPPL2AQ8TCT8 520 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 MSANTD3Q96H12 275 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 TWSG1Q9GZX9 223 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 ACSS1Q9NUB1 689 aaPredicted RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 A0A087WXM4 84 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 A0A1W2PR48 441 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 MAN2B1O00754 1011 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 B4GAT1O43505 415 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 SRFP11831 508 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 RABIFP47224 123 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 OR1E2P47887 323 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 SNRPNP63162 240 aaKnown RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 CRB2Q5IJ48 1285 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 KIAA0895LQ68EN5 471 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 KDM4DQ6B0I6 523 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 DGLUCYQ7Z3D6 616 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 C8orf59Q8N0T1 100 aaPredicted RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 DGCR14Q96DF8 476 aaKnown RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 GLIPR2Q9H4G4 154 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 UBE2ZQ9H832 354 aaPredicted RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 REEP1Q9H902 201 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 THUMPD1Q9NXG2 353 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms