RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ASPDHA6ND91 283 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 WASHC1A8K0Z3 465 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 PLPP1O14494 284 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 OR7A17O14581 309 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 ZNF354AO60765 605 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 KRT38O76015 456 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 SCELO95171 688 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 SP1P08047 785 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 SBK3P0C264 359 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 GFAPP14136 432 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 EPB42P16452 691 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 CNTFP26441 200 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 TYK2P29597 1187 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 SERPINB8P50452 374 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 ALDH18A1P54886 795 aaKnown RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 HNRNPH2P55795 449 aaKnown RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 HSD17B7P56937 341 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 TAS2R50P59544 299 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 RPS13P62277 151 aaKnown RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 OC90Q02509 493 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 GTF2H2Q13888 395 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 PCBP2Q15366 365 aaKnown RBP eCLIP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 FAM83EQ2M2I3 478 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 PAGE2BQ5JRK9 111 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 KHDRBS2Q5VWX1 349 aaKnown RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 GTF2H2CQ6P1K8 395 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 KLC3Q6P597 504 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 GFRALQ6UXV0 394 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 TRMT10CQ7L0Y3 403 aaKnown RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 MAMDC2Q7Z304 686 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 SIAH3Q8IW03 269 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 CHERPQ8IWX8 916 aaKnown RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 CNPY4Q8N129 248 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 LGI4Q8N135 537 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 CPSF7Q8N684 471 aaKnown RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 OR52B6Q8NGF0 335 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 SUN3Q8TAQ9 357 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 ANKRD9Q96BM1 317 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 KCNC2Q96PR1 638 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 MTERF1Q99551 399 aaKnown RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 TRIM45Q9H8W5 580 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 COPS7BQ9H9Q2 264 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-203ENST00000444440 ADAP2Q9NPF8 381 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 DMRT3Q9NQL9 472 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 XPR1Q9UBH6 696 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 RNF11Q9Y3C5 154 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 ADGRG4Q8IZF6 3080 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 FBN2P35556 2912 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 SYCE1LA8MT33 242 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 POC1B-GALNT4F8VUJ3 575 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 FGF17O60258 216 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 NME2P1O60361 137 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 CTNSO60931 367 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 EEDO75530 441 aaKnown RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 SLC25A12O75746 678 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 NME2P22392 152 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 HIST1H1TP22492 207 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 EEF1DP29692 281 aaKnown RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 TRHRP34981 398 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 DCTP40126 519 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 RFC3P40938 356 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 HSF1Q00613 529 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 CPSF6Q16630 551 aaKnown RBP eCLIP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 HIST2H2ACQ16777 129 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 DEPDC1Q5TB30 811 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 C18orf63Q68DL7 685 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 HIST2H2AA3Q6FI13 130 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 SLC25A25Q6KCM7 469 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 NCCRP1Q6ZVX7 275 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 MDGA2Q7Z553 956 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 FGD2Q7Z6J4 655 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 MYLK4Q86YV6 388 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 OR4N5Q8IXE1 308 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 ZNF595Q8IYB9 648 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 TMEM151AQ8N4L1 468 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 PTGR2Q8N8N7 351 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 EIF1ADQ8N9N8 165 aaKnown RBP10.12□□□□□ -0.79
SF3A1-203ENST00000444440 DNAJB8Q8NHS0 232 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 WDR20Q8TBZ3 569 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 DOK4Q8TEW6 326 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 PHF21BQ96EK2 531 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 CMTM7Q96FZ5 175 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 VMP1Q96GC9 406 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 CCDC77Q9BR77 488 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 TBCDQ9BTW9 1192 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 ALOXE3Q9BYJ1 711 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 DEFB126Q9BYW3 111 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 L2HGDHQ9H9P8 463 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 LYRM4Q9HD34 91 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 SEC14L3Q9UDX4 400 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 SH3BGRL2Q9UJC5 107 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 FBXW2Q9UKT8 454 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 ATG4BQ9Y4P1 393 aa10.12□□□□□ -0.79
SF3A1-203ENST00000444440 A0A088AWK7 358 aa10.11□□□□□ -0.79
SF3A1-203ENST00000444440 A0A0G2JMM0 328 aa10.11□□□□□ -0.79
SF3A1-203ENST00000444440 A0A1W2PPB8 328 aa10.11□□□□□ -0.79
SF3A1-203ENST00000444440 A0A1W2PRS3 328 aa10.11□□□□□ -0.79
SF3A1-203ENST00000444440 A0A1W2PS29 197 aa10.11□□□□□ -0.79
SF3A1-203ENST00000444440 PINLYPA6NC86 204 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms