RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CHTF18Q8WVB6 975 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 TSLPQ969D9 159 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 CSF3RQ99062 836 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 ACPTQ9BZG2 426 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 ZNF700Q9H0M5 742 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 ZNF160Q9HCG1 818 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 NECTIN3Q9NQS3 549 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 PRTFDC1Q9NRG1 225 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 MS4A12Q9NXJ0 267 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 PHF11Q9UIL8 331 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 ADAM29Q9UKF5 820 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 FIS1Q9Y3D6 152 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 ATG4BQ9Y4P1 393 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 MMACHCQ9Y4U1 282 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 ASB4Q9Y574 426 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 CACNA1BQ00975 2339 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 SCN3AQ9NY46 2000 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 IGHV3-20A0A0C4DH32 117 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 A0A1W2PQ72 361 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 BLACEA4D250 179 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 TMEM114B3SHH9 223 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 PROM1O43490 865 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 TMPRSS11DO60235 418 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 CTNSO60931 367 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 HSPA4LO95757 839 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 CHEK2O96017 543 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 BGNP21810 368 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 GRK2P25098 689 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 TPP2P29144 1249 aaPredicted RBP11.58□□□□□ -0.56
USP1-203ENST00000442679 ARRB2P32121 409 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 HNRNPH2P55795 449 aaKnown RBP11.58□□□□□ -0.56
USP1-203ENST00000442679 OR4D2P58180 307 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 BTKQ06187 659 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 AIMP2Q13155 320 aaKnown RBP11.58□□□□□ -0.56
USP1-203ENST00000442679 STX3Q13277 289 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 KCNAB2Q13303 367 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 PCOLCEQ15113 449 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 IMPG1Q17R60 797 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 SFT2D3Q587I9 215 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 SPDYAQ5MJ70 313 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 SH2D4BQ5SQS7 431 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 CES4AQ5XG92 561 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 KANK2Q63ZY3 851 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 MRM1Q6IN84 353 aaKnown RBP11.58□□□□□ -0.56
USP1-203ENST00000442679 ATG14Q6ZNE5 492 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 TRIM46Q7Z4K8 759 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 HOMEZQ8IX15 550 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 PARP9Q8IXQ6 854 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 CLYBLQ8N0X4 340 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 GALNT16Q8N428 558 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 C1orf52Q8N6N3 182 aaKnown RBP11.58□□□□□ -0.56
USP1-203ENST00000442679 AGR3Q8TD06 166 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 ADNPQ9H2P0 1102 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 ZDHHC2Q9UIJ5 367 aa11.58□□□□□ -0.56
USP1-203ENST00000442679 PCSK5Q92824 1860 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 IGKV3D-11A0A0A0MRZ8 115 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 A0A1W2PR48 441 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 TCRBV16S1A1N1A0A5B0 115 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 HMGB1P1B2RPK0 211 aaPredicted RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 TMEM233B4DJY2 109 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 MKRN2OSH3BPM6 223 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 SLC28A1O00337 649 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 ATXN7O15265 892 aaPredicted RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 ITM2AO43736 263 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 LYPLA1O75608 230 aaPredicted RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 SEC24DO94855 1032 aaPredicted RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 LINC00032P0C843 101 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 BUD31P41223 144 aaPredicted RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 SLC1A6P48664 564 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 MAPK12P53778 367 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 ABCE1P61221 599 aaKnown RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 TNFRSF17Q02223 184 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 ACSM2AQ08AH3 577 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 Q0VFX4 171 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 STX4Q12846 297 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 LY6DQ14210 128 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 UGT3A2Q3SY77 523 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 SPIN4Q56A73 249 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 ACSM2BQ68CK6 577 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 C18orf63Q68DL7 685 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 CLNKQ7Z7G1 428 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 SCUBE1Q8IWY4 988 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 KBTBD2Q8IY47 623 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 LSM14AQ8ND56 463 aaKnown RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 TANKQ92844 425 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 ABHD17AQ96GS6 310 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 APIPQ96GX9 242 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 IMMP1LQ96LU5 166 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 TUBB6Q9BUF5 446 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 ACBD3Q9H3P7 528 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 RPF2Q9H7B2 306 aaKnown RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 ZNF395Q9H8N7 513 aaPredicted RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 RIC8BQ9NVN3 520 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 ZNF446Q9NWS9 450 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 RALYQ9UKM9 306 aaKnown RBP11.57□□□□□ -0.56
USP1-203ENST00000442679 DNAJC15Q9Y5T4 150 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 ATMQ13315 3056 aa11.57□□□□□ -0.56
USP1-203ENST00000442679 IGSF10Q6WRI0 2623 aa11.56□□□□□ -0.56
USP1-203ENST00000442679 MYOCOSA0A1B0GUC4 107 aa11.56□□□□□ -0.56
USP1-203ENST00000442679 GLOD5A6NK44 160 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms