RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TBC1D20Q96BZ9 403 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 VPS35Q96QK1 796 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF382Q96SR6 550 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 CD180Q99467 661 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCBD2Q9H0N5 130 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SOX17Q9H6I2 414 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 ASIC5Q9NY37 505 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC25A37Q9NYZ2 338 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 KLHL42Q9P2K6 505 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TEKT2Q9UIF3 430 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 UTS2RQ9UKP6 389 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 CORINQ9Y5Q5 1042 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 A0A087WXM4 84 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 VPS4BO75351 444 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SUPT7LO94864 414 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 LBPP18428 481 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 EPORP19235 508 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 GGT1P19440 569 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 EEF1DP29692 281 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 FOLR3P41439 243 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PRLHRP49683 370 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 HNRNPFP52597 415 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TAS2R50P59544 299 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 LIPEQ05469 1076 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TRAF3Q13114 568 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 AQP6Q13520 282 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 C16orf72Q14CZ0 275 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCBP2Q15366 365 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 FIGLAQ6QHK4 219 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMPRSS7Q7RTY8 843 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMEM179BQ7Z7N9 219 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAM181AQ8N9Y4 354 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 GALNT6Q8NCL4 622 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PYCR2Q96C36 320 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 DPH7Q9BTV6 452 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 NRSN2Q9GZP1 204 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SEMA6CQ9H3T2 930 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 MID1IP1Q9NPA3 183 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC6A13Q9NSD5 602 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCDHGB1Q9Y5G3 927 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 AP1M2Q9Y6Q5 423 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 DYTNA2CJ06 578 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAM234BA2RU67 622 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMEM8BA6NDV4 472 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMEM229AB2RXF0 380 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 NR5A2O00482 541 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 B4GAT1O43505 415 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 CPNE3O75131 537 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 MYO1DO94832 1006 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 UROSP10746 265 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 IL1RNP18510 177 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 JAK1P23458 1154 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 CRHBPP24387 322 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TEAD1P28347 426 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 ARSFP54793 590 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 ERVK-8P63133 956 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 ABHD18Q0P651 414 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 RAPSNQ13702 412 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 KCNAB1Q14722 419 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TSNQ15631 228 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PFKFB4Q16877 469 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TBCELQ5QJ74 424 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PLEKHS1Q5SXH7 462 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PRAMEF13Q5VWM6 474 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 HLA-DQA1Q5Y7H0 255 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PLD3Q8IV08 490 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SMYD1Q8NB12 490 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZPBPQ9BS86 351 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 C9orf16Q9BUW7 83 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 EXO5Q9H790 373 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SERHLQ9NQF3 203 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 C1GALT1Q9NS00 363 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR6C2Q9NZP2 312 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 OPTCQ9UBM4 332 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SRPK3Q9UPE1 567 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PLCL2Q9UPR0 1127 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 BTRCQ9Y297 605 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 C17orf113A0A1B0GUU1 675 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 SAC3D1A6NKF1 404 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 NPIPB8E9PQR5 432 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 C8GP07360 202 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 NCK1P16333 377 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PIGAP37287 484 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAGEA2P43356 314 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PHC1P78364 1004 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 RPS6KA2Q15349 733 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 GPR19Q15760 415 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 TCTE1Q5JU00 501 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ANKRD34AQ69YU3 496 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 SHISA6Q6ZSJ9 500 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PDZD3Q86UT5 571 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 LILRA3Q8N6C8 439 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCYOX1LQ8NBM8 494 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 TNIP2Q8NFZ5 429 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR4D9Q8NGE8 314 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF566Q969W8 418 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 DACH2Q96NX9 599 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 RIC8BQ9NVN3 520 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 SMPD3Q9NY59 655 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms