RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SEMA3GQ9NS98 782 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 NDUFA13Q9P0J0 144 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 WNT16Q9UBV4 365 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 APOBEC3BQ9UH17 382 aaKnown RBP12.51□□□□□ -0.41
CPSF4-206ENST00000441580 PHF11Q9UIL8 331 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-206ENST00000441580 PADI2Q9Y2J8 665 aa12.51□□□□□ -0.41
CPSF4-206ENST00000441580 A0A0J9YY10 115 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SMIM31A0A1B0GVY4 71 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 TMEM247A6NEH6 219 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 C5orf58C9J3I9 102 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 ADAMDEC1O15204 470 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 NDUFS2O75306 463 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 H6PDO95479 791 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 AIFM1O95831 613 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 NUDT7P0C024 238 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 NR2F6P10588 404 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 CDH2P19022 906 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-206ENST00000441580 CD27P26842 260 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 DNAJA1P31689 397 aaKnown RBP12.5□□□□□ -0.41
CPSF4-206ENST00000441580 DCTP40126 519 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 KHKP50053 298 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 STARD6P59095 220 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 HSPB3Q12988 150 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SUZ12Q15022 739 aaKnown RBP12.5□□□□□ -0.41
CPSF4-206ENST00000441580 CCDC85BQ15834 202 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-206ENST00000441580 IFI44LQ53G44 452 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 COX20Q5RI15 118 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 TTC23Q5W5X9 447 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 USP51Q70EK9 711 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 RNF44Q7L0R7 432 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 VN1R4Q7Z5H5 301 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 TAF8Q7Z7C8 310 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SAMD14Q8IZD0 417 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-206ENST00000441580 NAGSQ8N159 534 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 CAMKVQ8NCB2 501 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 OR10G6Q8NH81 332 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 OR5AK3PQ8NH89 298 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 NFKBIDQ8NI38 313 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SLC37A2Q8TED4 501 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 GEMIN6Q8WXD5 167 aaKnown RBP12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SLC35G5Q96KT7 338 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SPACA7Q96KW9 195 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SLC6A18Q96N87 628 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 OR2A14Q96R47 310 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 AICDAQ9GZX7 198 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 ABCG4Q9H172 646 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 REEP1Q9H902 201 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SLAMF7Q9NQ25 335 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SLC35C2Q9NQQ7 365 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 C1GALT1Q9NS00 363 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 THSD1Q9NS62 852 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SIRT3Q9NTG7 399 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-206ENST00000441580 GPATCH2Q9NW75 528 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 UTS2RQ9UKP6 389 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 FBXL21Q9UKT6 434 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 MAP4K5Q9Y4K4 846 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 SNX8Q9Y5X2 465 aa12.5□□□□□ -0.41
CPSF4-206ENST00000441580 OR6C74A6NCV1 312 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 H3BNH8 94 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 CLPTM1O96005 669 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ITGA2P17301 1181 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 MAGP20916 626 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 CERS1P27544 350 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 GPC1P35052 558 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 RPL5P46777 297 aaKnown RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 RPS6KA3P51812 740 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 PCBP3P57721 371 aaKnown RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 TUBA4AP68366 448 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ADARB1P78563 741 aaKnown RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 TNFRSF17Q02223 184 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 EEF1A2Q05639 463 aaKnown RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 SLAMF1Q13291 335 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 IL18R1Q13478 541 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 SPIDRQ14159 915 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 TCEA2Q15560 299 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 PRSS53Q2L4Q9 553 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ZC3H12BQ5HYM0 836 aaKnown RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 CRB2Q5IJ48 1285 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ARMC6Q6NXE6 501 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ABHD13Q7L211 337 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ZC3H7AQ8IWR0 971 aaKnown RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 FAM20CQ8IXL6 584 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ARL10Q8N8L6 244 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 CADM4Q8NFZ8 388 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 OR56A1Q8NGH5 318 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 OR8K5Q8NH50 307 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 MAL2Q969L2 176 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 RERGQ96A58 199 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 TPD52L3Q96J77 140 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 BBS4Q96RK4 519 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 SERINC2Q96SA4 455 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ZNF347Q96SE7 839 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 EPYCQ99645 322 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ZFYVE21Q9BQ24 234 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ORAI3Q9BRQ5 295 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms