RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 COX7A2P14406 83 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 HSD17B3P37058 310 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 TNFSF10P50591 281 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 CDH13P55290 713 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 OC90Q02509 493 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 ELAVL1Q15717 326 aaKnown RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 INAQ16352 499 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 ACER2Q5QJU3 275 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 EMBQ6PCB8 327 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 FAM180AQ6UWF9 173 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 PAGE2Q7Z2X7 111 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 UBE3DQ7Z6J8 389 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 GPR180Q86V85 440 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 NUDT13Q86X67 352 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 CRLF3Q8IUI8 442 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 SCUBE1Q8IWY4 988 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 RIBC1Q8N443 379 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 TMEM151AQ8N4L1 468 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 CCDC63Q8NA47 563 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 FAM98AQ8NCA5 519 aaKnown RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 B3GNT7Q8NFL0 401 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 OR52B6Q8NGF0 335 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 TRPC4APQ8TEL6 797 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 ZNF483Q8TF39 744 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 SELENOMQ8WWX9 145 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 TANKQ92844 425 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 VMP1Q96GC9 406 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 MAPKAP1Q9BPZ7 522 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 ROPN1BQ9BZX4 212 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 RPF2Q9H7B2 306 aaKnown RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 ANKZF1Q9H8Y5 726 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 ROPN1Q9HAT0 212 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 ZBTB26Q9HCK0 441 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 ASF1BQ9NVP2 202 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 LYARQ9NX58 379 aaKnown RBP9.8□□□□□ -0.84
MCF2L-216ENST00000439475 KCMF1Q9P0J7 381 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 VTI1BQ9UEU0 232 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 TRPS1Q9UHF7 1281 aa9.8□□□□□ -0.84
MCF2L-216ENST00000439475 A0A1W2PPM1 405 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 ESPNB1AK53 854 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 PLPP1O14494 284 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 COPEO14579 308 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 DLX3O60479 287 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 PRAMEF2O60811 474 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 ZFAND5O76080 213 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 RASAL1O95294 804 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 CRYABP02511 175 aaKnown RBP9.79□□□□□ -0.84
MCF2L-216ENST00000439475 KRT6AP02538 564 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 KRT6BP04259 564 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 SHBGP04278 402 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 SBK3P0C264 359 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 MYL2P10916 166 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 CD46P15529 392 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 HMOX2P30519 316 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 SLCO1A2P46721 670 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 KRT6CP48668 564 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 NEK2P51955 445 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 PRKAA2P54646 552 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 UNC50Q53HI1 259 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 ZNF678Q5SXM1 525 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 FHL5Q5TD97 284 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 WDR93Q6P2C0 686 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 ZNF793Q6ZN11 406 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 HOMEZQ8IX15 550 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 RNF175Q8N4F7 328 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 BCORP1Q8N888 145 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 MORN4Q8NDC4 146 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 NFAM1Q8NET5 270 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-216ENST00000439475 OR14A16Q8NHC5 309 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 DNAJB8Q8NHS0 232 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 FAR1Q8WVX9 515 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 RBM18Q96H35 190 aaKnown RBP9.79□□□□□ -0.84
MCF2L-216ENST00000439475 ART5Q96L15 291 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 NSUN5Q96P11 429 aaKnown RBP9.79□□□□□ -0.84
MCF2L-216ENST00000439475 DGAT2Q96PD7 388 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 CSF3RQ99062 836 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 PELOQ9BRX2 385 aaKnown RBP9.79□□□□□ -0.84
MCF2L-216ENST00000439475 IQCGQ9H095 443 aaKnown RBP9.79□□□□□ -0.84
MCF2L-216ENST00000439475 DDX31Q9H8H2 851 aaKnown RBP9.79□□□□□ -0.84
MCF2L-216ENST00000439475 BRF2Q9HAW0 419 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 ADAM29Q9UKF5 820 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 PCDHGB6Q9Y5F9 930 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 CSAG2Q9Y5P2 127 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 NBEAQ8NFP9 2946 aa9.79□□□□□ -0.84
MCF2L-216ENST00000439475 GABRR3A8MPY1 467 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 TCP11X1B4DZS4 312 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 LDB3O75112 727 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 OR4F21O95013 312 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 F10P00742 488 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 FAM58BPP0C7Q3 252 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 HSD3B1P14060 373 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 GNLYP22749 145 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 HSD3B2P26439 372 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 CRHR1P34998 444 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 BSGP35613 385 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 CYB561P49447 251 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 HNRNPFP52597 415 aaKnown RBP9.78□□□□□ -0.84
MCF2L-216ENST00000439475 PKNOX1P55347 436 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 VSNL1P62760 191 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 TNFRSF17Q02223 184 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms