RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 PRSS41Q7RTY9 318 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 VN1R4Q7Z5H5 301 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 CPEB2Q7Z5Q1 589 aaKnown RBP8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 C17orf64Q86WR6 236 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 LRRC56Q8IYG6 542 aaPredicted RBP8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 ARHGEF39Q8N4T4 335 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 CAMKVQ8NCB2 501 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 PDPRQ8NCN5 879 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 OR6Y1Q8NGX8 325 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 OR51Q1Q8NH59 317 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 DNAJB8Q8NHS0 232 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 RAB3IL1Q8TBN0 382 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 RELTQ969Z4 430 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 FBXL8Q96CD0 374 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 L3HYPDHQ96EM0 354 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 IMMP1LQ96LU5 166 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 TMEM237Q96Q45 408 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 ERVK-6Q9BXR3 956 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 PCBD2Q9H0N5 130 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 ATG10Q9H0Y0 220 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 CCDC134Q9H6E4 229 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 KCNK13Q9HB14 408 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 ANKHQ9HCJ1 492 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 ABI3Q9P2A4 366 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 SEC14L3Q9UDX4 400 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 SH3BGRL2Q9UJC5 107 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 ENTPD4Q9Y227 616 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 ASB1Q9Y576 335 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 TNPO3Q9Y5L0 923 aaKnown RBP8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 TACC2O95359 2948 aa8.66□□□□□ -1.02
AC011228.1-201ENST00000439027 KCNE1BA0A087WTH5 132 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 TMEM114B3SHH9 223 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 FAM227AF5H4B4 570 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 CCL21O00585 134 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 KLF11O14901 512 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 CCNT2O60583 730 aaKnown RBP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 RDH16O75452 317 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 LYPLA1O75608 230 aaPredicted RBP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 STK16O75716 305 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 NSA2O95478 260 aaKnown RBP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 SERPIND1P05546 499 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 VIMP08670 466 aaKnown RBP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 CDH1P12830 882 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 TSPAN8P19075 237 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 MST1P26927 711 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 GRK3P35626 688 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 BCL6P41182 706 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 GDF5P43026 501 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 SLC1A6P48664 564 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 HNMTP50135 292 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ST13P50502 369 aaKnown RBP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 TDGF1P3P51864 188 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 EFNA3P52797 238 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 CASP6P55212 293 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 CDH13P55290 713 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ABCE1P61221 599 aaKnown RBP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 CSNK1G2P78368 415 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 PMP22Q01453 160 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 RBPJQ06330 500 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 RCN2Q14257 317 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 PCBP2Q15366 365 aaKnown RBP eCLIP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ZXDCQ2QGD7 858 aaPredicted RBP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ZNF766Q5HY98 468 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 AGTRAPQ6RW13 159 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 RGS9BPQ6ZS82 235 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 FAM47EQ6ZV65 393 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ANKRD37Q7Z713 158 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ASPGQ86U10 573 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 LRRC34Q8IZ02 419 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 SHISA5Q8N114 240 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 TCAIMQ8N3R3 496 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 UBTD2Q8WUN7 234 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 SLC13A3Q8WWT9 602 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ATL1Q8WXF7 558 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 PYCR2Q96C36 320 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ZNF354BQ96LW1 612 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 NSUN5Q96P11 429 aaKnown RBP8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 TMEM79Q9BSE2 394 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 RBCK1Q9BYM8 510 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 CD244Q9BZW8 370 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 RNF32Q9H0A6 362 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 RUBCNLQ9H714 662 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 SLCO1B3Q9NPD5 702 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 KLHL1Q9NR64 748 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 OPTCQ9UBM4 332 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 PCTPQ9UKL6 214 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 SH2B3Q9UQQ2 575 aa8.65□□□□□ -1.02
AC011228.1-201ENST00000439027 ZNF860A6NHJ4 632 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 K7EPI3 171 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 PPP6CO00743 305 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 LCMT2O60294 686 aaKnown RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 NPHS1O60500 1241 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 SNNO75324 88 aaPredicted RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 CDC123O75794 336 aaPredicted RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 HSPA4LO95757 839 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 RPS17P08708 135 aaKnown RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 ARRB2P32121 409 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 GGT5P36269 586 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 SLC6A12P48065 614 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms