RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 LDB1Q86U70 411 aaPredicted RBP9.98□□□□□ -0.81
RTN4-211ENST00000438462 SERPINA9Q86WD7 417 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 CREBRFQ8IUR6 639 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 RCOR2Q8IZ40 523 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 RAB42Q8N4Z0 105 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 PAQR8Q8TEZ7 354 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 PDLIM2Q96JY6 352 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 DOHHQ9BU89 302 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 C1QTNF5Q9BXJ0 243 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 UBQLN3Q9H347 655 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 PNO1Q9NRX1 252 aaKnown RBP9.98□□□□□ -0.81
RTN4-211ENST00000438462 DDX28Q9NUL7 540 aaKnown RBP9.98□□□□□ -0.81
RTN4-211ENST00000438462 DNAJC11Q9NVH1 559 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 SYBUQ9NX95 663 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 CTNND2Q9UQB3 1225 aa9.98□□□□□ -0.81
RTN4-211ENST00000438462 CCL22O00626 93 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 AP2A2O94973 939 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 CD8BP10966 210 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 CPN1P15169 458 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 PPP2R1BP30154 601 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 EFNA4P52798 201 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 CDH11P55287 796 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 CDH15P55291 814 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 EIF3BP55884 814 aaKnown RBP9.97□□□□□ -0.81
RTN4-211ENST00000438462 PLOD1Q02809 727 aaPredicted RBP9.97□□□□□ -0.81
RTN4-211ENST00000438462 GBE1Q04446 702 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 CCDC183Q5T5S1 534 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 KPRPQ5T749 579 aaPredicted RBP9.97□□□□□ -0.81
RTN4-211ENST00000438462 STAC2Q6ZMT1 411 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 P4HA3Q7Z4N8 544 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 NELFBQ8WX92 580 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 RBM4BQ9BQ04 359 aaKnown RBP9.97□□□□□ -0.81
RTN4-211ENST00000438462 BPESC1Q9GZL8 116 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 PRDM9Q9NQV7 894 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 ACSS1Q9NUB1 689 aaPredicted RBP9.97□□□□□ -0.81
RTN4-211ENST00000438462 HEY2Q9UBP5 337 aa9.97□□□□□ -0.81
RTN4-211ENST00000438462 H7C417 338 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 KIF5CO60282 957 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 GPC4O75487 556 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 ACTL6AO96019 429 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 MDKP21741 143 aaPredicted RBP9.96□□□□□ -0.82
RTN4-211ENST00000438462 APEX1P27695 318 aaKnown RBP9.96□□□□□ -0.82
RTN4-211ENST00000438462 WNT3AP56704 352 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 BSPH1Q075Z2 132 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 MAMLD1Q13495 774 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 KRT81Q14533 505 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 SLC1A5Q15758 541 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 CARTPTQ16568 116 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 SBSNQ6UWP8 590 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 HSDL2Q6YN16 418 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 RHOUQ7L0Q8 258 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 KCT2Q8NC54 265 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 OR13C4Q8NGS5 318 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 GABPB2Q8TAK5 448 aaPredicted RBP9.96□□□□□ -0.82
RTN4-211ENST00000438462 ASZ1Q8WWH4 475 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 TAF15Q92804 592 aaKnown RBP eCLIP9.96□□□□□ -0.82
RTN4-211ENST00000438462 CBLN4Q9NTU7 201 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 UTP6Q9NYH9 597 aaKnown RBP9.96□□□□□ -0.82
RTN4-211ENST00000438462 SMARCAL1Q9NZC9 954 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 TTC7AQ9ULT0 858 aaPredicted RBP9.96□□□□□ -0.82
RTN4-211ENST00000438462 PROCRQ9UNN8 238 aa9.96□□□□□ -0.82
RTN4-211ENST00000438462 DNAH3Q8TD57 4116 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 CHST10O43529 356 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 RAMP1O60894 148 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 TRIM3O75382 744 aaPredicted RBP9.95□□□□□ -0.82
RTN4-211ENST00000438462 TSPAN15O95858 294 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 NFKB1P19838 968 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 TNNT3P45378 269 aaPredicted RBP9.95□□□□□ -0.82
RTN4-211ENST00000438462 HSPA14Q0VDF9 509 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 TBL3Q12788 808 aaKnown RBP9.95□□□□□ -0.82
RTN4-211ENST00000438462 SLC10A2Q12908 348 aaPredicted RBP9.95□□□□□ -0.82
RTN4-211ENST00000438462 TSTA3Q13630 321 aaPredicted RBP9.95□□□□□ -0.82
RTN4-211ENST00000438462 ZNF791Q3KP31 576 aaPredicted RBP9.95□□□□□ -0.82
RTN4-211ENST00000438462 FOXD4L5Q5VV16 416 aaPredicted RBP9.95□□□□□ -0.82
RTN4-211ENST00000438462 OR2A2Q6IF42 318 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 ENPP6Q6UWR7 440 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 MAGEC3Q8TD91 643 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 WFDC12Q8WWY7 111 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 ATL1Q8WXF7 558 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 FOXD4L4Q8WXT5 416 aaPredicted RBP9.95□□□□□ -0.82
RTN4-211ENST00000438462 RAD51AP1Q96B01 352 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 ZBTB8AQ96BR9 441 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 FOXN4Q96NZ1 517 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 GLOD4Q9HC38 313 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 TAC3Q9UHF0 121 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 C15orf41Q9Y2V0 281 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 SPEF1Q9Y4P9 236 aa9.95□□□□□ -0.82
RTN4-211ENST00000438462 DNAH9Q9NYC9 4486 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 TRBV5-4A0A0C4DH59 114 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 BICDL2A1A5D9 508 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 RBMY1BA6NDE4 496 aaKnown RBP9.94□□□□□ -0.82
RTN4-211ENST00000438462 RBMY1EA6NEQ0 496 aaKnown RBP9.94□□□□□ -0.82
RTN4-211ENST00000438462 PLOD2O00469 737 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 TIMM23O14925 209 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 EMC8O43402 210 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 HCRTR2O43614 444 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 RBMY1DP0C7P1 496 aaKnown RBP9.94□□□□□ -0.82
RTN4-211ENST00000438462 MC4RP32245 332 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 RPA3P35244 121 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms