RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DTWD1Q8N5C7 304 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 NATD1Q8N6N6 113 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 OR5T3Q8NGG3 340 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 MMABQ96EY8 250 aaPredicted RBP21.75■■□□□ 1.07
CPSF4-204ENST00000436336 RMND5AQ9H871 391 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 WDR41Q9HAD4 459 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 PRDM9Q9NQV7 894 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 TAS2R1Q9NYW7 299 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 CDC14AQ9UNH5 594 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 DKK1O94907 266 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 MT-CO3P00414 261 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 NR2F6P10588 404 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 TLX1P31314 330 aaPredicted RBP21.74■■□□□ 1.07
CPSF4-204ENST00000436336 RAB38P57729 211 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 MC2RQ01718 297 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 ART3Q13508 389 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 PAGE3Q5JUK9 113 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 ANXA8L1Q5VT79 327 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 PRAMEF17Q5VTA0 474 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 SLC2A7Q6PXP3 512 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 DHRS13Q6UX07 377 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 SLCO6A1Q86UG4 719 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 DPP10Q8N608 796 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 RBM15BQ8NDT2 890 aaKnown RBP21.74■■□□□ 1.07
CPSF4-204ENST00000436336 FBXO27Q8NI29 283 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 FBXO8Q9NRD0 319 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 TAS2R7Q9NYW3 318 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 MAP10Q9P2G4 905 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 FER1L5A0AVI2 2057 aa21.74■■□□□ 1.07
CPSF4-204ENST00000436336 ZNF292O60281 2723 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 KRT16P08779 473 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 ALAS2P22557 587 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 WNT3P56703 355 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 ACTN3Q08043 901 aaPredicted RBP21.73■■□□□ 1.07
CPSF4-204ENST00000436336 RHBDD2Q6NTF9 364 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 PRMT9Q6P2P2 845 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 HACD2Q6Y1H2 254 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 TMEM126BQ8IUX1 230 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 FAM47BQ8NA70 645 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 VPS37AQ8NEZ2 397 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 ROPN1LQ96C74 230 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 DEPDC7Q96QD5 511 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 BTBD10Q9BSF8 475 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 SLC7A5P2Q9GIP4 190 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 NDE1Q9NXR1 346 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 DHCR7Q9UBM7 475 aaKnown RBP21.73■■□□□ 1.07
CPSF4-204ENST00000436336 NDOR1Q9UHB4 597 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 CLCA2Q9UQC9 943 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 PCDHB3Q9Y5E6 796 aa21.73■■□□□ 1.07
CPSF4-204ENST00000436336 A0A1B0GX78 115 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 B4E171 279 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 POLR1CO15160 346 aaPredicted RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 CHST10O43529 356 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 SCN2BO60939 215 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 PRKRAO75569 313 aaKnown RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 SCRG1O75711 98 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 CPOXP36551 454 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 TSPAN7P41732 249 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 LRRC74AQ0VAA2 488 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 SLC48A1Q6P1K1 146 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 KIAA2013Q8IYS2 634 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 ADAMTS18Q8TE60 1221 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 UCN3Q969E3 161 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 LIN37Q96GY3 246 aaPredicted RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 LRMDAQ9H2I8 198 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 ACTR5Q9H9F9 607 aaPredicted RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 APMAPQ9HDC9 416 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 NUP210LQ5VU65 1888 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 ZFHX2Q9C0A1 2572 aaPredicted RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 PRSS51A0A1B0GVH4 220 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 RNASET2O00584 256 aaKnown RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 TM4SF5O14894 197 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 CSO75390 466 aaKnown RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 NPPAP01160 153 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 HBQ1P09105 142 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 FTH1P19P0C7X4 201 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 RNH1P13489 461 aaKnown RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 ITGAXP20702 1163 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 SHC2P98077 582 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 PRSS53Q2L4Q9 553 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 PWWP2BQ6NUJ5 590 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 DSELQ8IZU8 1212 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 METTL27Q8N6F8 245 aaPredicted RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 GTF2H4Q92759 462 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 ITCHQ96J02 903 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 CSF3RQ99062 836 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 RPF2Q9H7B2 306 aaKnown RBP21.72■■□□□ 1.07
CPSF4-204ENST00000436336 GID8Q9NWU2 228 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 HCN3Q9P1Z3 774 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 UTS2RQ9UKP6 389 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 CES1P1Q9UKY3 287 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 MAN2B2Q9Y2E5 1009 aa21.72■■□□□ 1.07
CPSF4-204ENST00000436336 CYR61O00622 381 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 PGRMC2O15173 223 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 GYG2O15488 501 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 TIAF1O95411 115 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 CCL4P13236 92 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 SLC25A3Q00325 362 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 NFYCQ13952 458 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms