RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 MLYCDO95822 493 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 MYL2P10916 166 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 CPN2P22792 545 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 TLX1P31314 330 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-207ENST00000435455 CRHR1P34998 444 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 NEK2P51955 445 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 SLAMF1Q13291 335 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 ZNF169Q14929 603 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-207ENST00000435455 ERCC6LQ2NKX8 1250 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 UNC50Q53HI1 259 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 LETMD1Q6P1Q0 360 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 SLC5A8Q8N695 610 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 ELP5Q8TE02 316 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 TRPC4APQ8TEL6 797 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 MTFMTQ96DP5 389 aaKnown RBP15.22■□□□□ 0.03
SMPD4-207ENST00000435455 L3HYPDHQ96EM0 354 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 TMEM237Q96Q45 408 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 ZNF382Q96SR6 550 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 SORBS1Q9BX66 1292 aaKnown RBP15.22■□□□□ 0.03
SMPD4-207ENST00000435455 DDX31Q9H8H2 851 aaKnown RBP15.22■□□□□ 0.03
SMPD4-207ENST00000435455 ADAP2Q9NPF8 381 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 PNO1Q9NRX1 252 aaKnown RBP15.22■□□□□ 0.03
SMPD4-207ENST00000435455 LYARQ9NX58 379 aaKnown RBP15.22■□□□□ 0.03
SMPD4-207ENST00000435455 STMN3Q9NZ72 180 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 FBXW2Q9UKT8 454 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 EMCNQ9ULC0 261 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 PCDHGA10Q9Y5H3 936 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 TRAV17A0A0B4J275 112 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 A8MUA0 341 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 TGFBR3LH3BV60 316 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 PPP6CO00743 305 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 PLIN3O60664 434 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 WDPCPO95876 746 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 PROCP04070 461 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 TSPAN8P19075 237 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 BSGP35613 385 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 BUD31P41223 144 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-207ENST00000435455 TNFSF10P50591 281 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 NAA20P61599 178 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 STX4Q12846 297 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 SERTAD2Q14140 314 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 ELAVL1Q15717 326 aaKnown RBP15.21■□□□□ 0.03
SMPD4-207ENST00000435455 MEP1AQ16819 746 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 ACER2Q5QJU3 275 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 CYP20A1Q6UW02 462 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 ZYG11AQ6WRX3 759 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 PAGE2Q7Z2X7 111 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 CLNKQ7Z7G1 428 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 GPR180Q86V85 440 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 LGI4Q8N135 537 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 TMEM132CQ8N3T6 1108 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 AMER2Q8N7J2 671 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 GALNT11Q8NCW6 608 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 NFAM1Q8NET5 270 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-207ENST00000435455 OR2W6PQ8NHA6 318 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 RDH11Q8TC12 318 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 PARD6BQ9BYG5 372 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 SLC29A3Q9BZD2 475 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 ROPN1BQ9BZX4 212 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-207ENST00000435455 ROPN1Q9HAT0 212 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-207ENST00000435455 NMRK1Q9NWW6 199 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 PLA2G3Q9NZ20 509 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 AHSPQ9NZD4 102 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 MAP10Q9P2G4 905 aa15.21■□□□□ 0.03
SMPD4-207ENST00000435455 CDK2AP1O14519 115 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 VPS4BO75351 444 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 MYO1DO94832 1006 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 OR4F21O95013 312 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 ETHE1O95571 254 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 KRT6AP02538 564 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 KRT6BP04259 564 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 IFNA16P05015 189 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 TUBBP07437 444 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 KRT4P19013 534 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 PPP2R1BP30154 601 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 KRT6CP48668 564 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 PKNOX1P55347 436 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 TNFRSF17Q02223 184 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 SLC18A2Q05940 514 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 LCP2Q13094 533 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 BIKQ13323 160 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 PRR30Q53SZ7 412 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-207ENST00000435455 SGO1Q5FBB7 561 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 GPRIN3Q6ZVF9 776 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 NUDT13Q86X67 352 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 CRLF3Q8IUI8 442 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 MREGQ8N565 214 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 CISD2Q8N5K1 135 aaKnown RBP15.2■□□□□ 0.02
SMPD4-207ENST00000435455 CCNYL1Q8N7R7 359 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 B3GNT7Q8NFL0 401 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 OR1N1Q8NGS0 311 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 SUN3Q8TAQ9 357 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 SELENOMQ8WWX9 145 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 TANKQ92844 425 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 SNRNP40Q96DI7 357 aaKnown RBP15.2■□□□□ 0.02
SMPD4-207ENST00000435455 ZNF717Q9BY31 904 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-207ENST00000435455 ALOXE3Q9BYJ1 711 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 DEFB126Q9BYW3 111 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMPD4-207ENST00000435455 RPF2Q9H7B2 306 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms