RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GPATCH1Q9BRR8 931 aaKnown RBP17.28■□□□□ 0.36
HMGN1-206ENST00000431390 MIEF1Q9NQG6 463 aa17.28■□□□□ 0.36
HMGN1-206ENST00000431390 SH3BP4Q9P0V3 963 aa17.28■□□□□ 0.36
HMGN1-206ENST00000431390 ATXN7L1Q9ULK2 861 aaPredicted RBP17.28■□□□□ 0.36
HMGN1-206ENST00000431390 B3GALT2O43825 422 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 SCN2BO60939 215 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 CD59P13987 128 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 SEPHS1P49903 392 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 EMP3P54852 163 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 WNT3P56703 355 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 NDUFA9Q16795 377 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 NIPAL1Q6NVV3 410 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 DLEU7Q6UYE1 221 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 ZNF574Q6ZN55 896 aaPredicted RBP17.27■□□□□ 0.35
HMGN1-206ENST00000431390 SPAG4Q9NPE6 437 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 SERHLQ9NQF3 203 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 TEX10Q9NXF1 929 aaPredicted RBP17.27■□□□□ 0.35
HMGN1-206ENST00000431390 EHD3Q9NZN3 535 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 FTSJ1Q9UET6 329 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 PTPRBP23467 1997 aa17.27■□□□□ 0.35
HMGN1-206ENST00000431390 C15orf38-AP3S2A0A0A6YYH1 394 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 PRSS51A0A1B0GVH4 220 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 FITM1A5D6W6 292 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 RNASET2O00584 256 aaKnown RBP17.26■□□□□ 0.35
HMGN1-206ENST00000431390 CASC3O15234 703 aaKnown RBP17.26■□□□□ 0.35
HMGN1-206ENST00000431390 ERN1O75460 977 aaKnown RBP17.26■□□□□ 0.35
HMGN1-206ENST00000431390 B3GALT4O96024 378 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 SKP1P63208 163 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 DEFB134Q4QY38 66 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 ZNF385BQ569K4 471 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 LRIF1Q5T3J3 769 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 NDUFAF5Q5TEU4 345 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 ANKRD26P1Q6NSI1 321 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 TMPRSS9Q7Z410 1059 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 ARHGAP22Q7Z5H3 698 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 ARPINQ7Z6K5 226 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 PROSER1Q86XN7 944 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 SCUBE1Q8IWY4 988 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 ULK2Q8IYT8 1036 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 NPLQ9BXD5 320 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-206ENST00000431390 IL1RL2Q9HB29 575 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 STARD5Q9NSY2 213 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 PHF11Q9UIL8 331 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 BTNL2Q9UIR0 455 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 MRPS2Q9Y399 296 aaKnown RBP17.26■□□□□ 0.35
HMGN1-206ENST00000431390 SCN3AQ9NY46 2000 aa17.26■□□□□ 0.35
HMGN1-206ENST00000431390 A0A096LPI6 279 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 C1orf226A1L170 272 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 NTN3O00634 580 aaPredicted RBP17.25■□□□□ 0.35
HMGN1-206ENST00000431390 GALR3O60755 368 aaPredicted RBP17.25■□□□□ 0.35
HMGN1-206ENST00000431390 CTSBP07858 339 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 TRPC1P48995 793 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 SNRPNP63162 240 aaKnown RBP17.25■□□□□ 0.35
HMGN1-206ENST00000431390 FAM53BQ14153 422 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 C6orf10Q5SRN2 563 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 PGM2L1Q6PCE3 622 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 TICAM1Q8IUC6 712 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 FAM47BQ8NA70 645 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 CCDC115Q96NT0 180 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 GFM1Q96RP9 751 aaKnown RBP17.25■□□□□ 0.35
HMGN1-206ENST00000431390 CDRT15Q96T59 188 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 ANKHQ9HCJ1 492 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 LYRM4Q9HD34 91 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 MS4A12Q9NXJ0 267 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 TAS2R7Q9NYW3 318 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 SLAMF8Q9P0V8 285 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 TMEM181Q9P2C4 612 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 ABCD2Q9UBJ2 740 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 PCDHA9Q9Y5H5 950 aa17.25■□□□□ 0.35
HMGN1-206ENST00000431390 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.25■□□□□ 0.35
HMGN1-206ENST00000431390 DSPP15924 2871 aaKnown RBP17.24■□□□□ 0.35
HMGN1-206ENST00000431390 IGHV5-10-1A0A0J9YXX1 117 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 A8MU76 341 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 H3BMH7 237 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 RFXANKO14593 260 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 PROM1O43490 865 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 CAPNS1P04632 268 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 SLC6A2P23975 617 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 KCNAB1Q14722 419 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 GRM7Q14831 915 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 MMP21Q8N119 569 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 TTC29Q8NA56 475 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-206ENST00000431390 C10orf90Q96M02 699 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 CGREF1Q99674 301 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 MAPKAP1Q9BPZ7 522 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 SLC39A3Q9BRY0 314 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 PAIP1Q9H074 479 aaKnown RBP17.24■□□□□ 0.35
HMGN1-206ENST00000431390 SYNDIG1Q9H7V2 258 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 PRDM9Q9NQV7 894 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 FBXW2Q9UKT8 454 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 DAPP1Q9UN19 280 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 NAALAD2Q9Y3Q0 740 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 ATG4BQ9Y4P1 393 aa17.24■□□□□ 0.35
HMGN1-206ENST00000431390 FASNP49327 2511 aaKnown RBP17.24■□□□□ 0.35
HMGN1-206ENST00000431390 A0A1W2PR48 441 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 HYKKA2RU49 373 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 TMEM150CB9EJG8 249 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 H0YHG0 523 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 IL1RNP18510 177 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 BUD31P41223 144 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms