RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 SNX24Q9Y343 169 aa12.91□□□□□ -0.34
SEC13-211ENST00000431352 LIPGQ9Y5X9 500 aa12.91□□□□□ -0.34
SEC13-211ENST00000431352 AKAP9Q99996 3911 aa12.91□□□□□ -0.34
SEC13-211ENST00000431352 CXorf49A8MYA2 514 aaPredicted RBP12.9□□□□□ -0.34
SEC13-211ENST00000431352 C17orf105B2RV13 164 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 TP73O15350 636 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 CCNT2O60583 730 aaKnown RBP12.9□□□□□ -0.34
SEC13-211ENST00000431352 STK16O75716 305 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 S100BP04271 92 aaPredicted RBP12.9□□□□□ -0.34
SEC13-211ENST00000431352 PCNAP12004 261 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 CD22P20273 847 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 HPDP32754 393 aaPredicted RBP12.9□□□□□ -0.34
SEC13-211ENST00000431352 GMPRP36959 345 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 MSH2P43246 934 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 HK2P52789 917 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 NUP107P57740 925 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 POU4F1Q01851 419 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 PMPCAQ10713 525 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 ADPRMQ3LIE5 342 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 EMC4Q5J8M3 183 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 SULT1C3Q6IMI6 304 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 ZNF585AQ6P3V2 769 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 PAOXQ6QHF9 649 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 RTL4Q6ZR62 310 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 SLC22A16Q86VW1 577 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 CREG2Q8IUH2 290 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 GPALPP1Q8IXQ4 340 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 OR14A16Q8NHC5 309 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 SLC2A12Q8TD20 617 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 PTPMT1Q8WUK0 201 aaPredicted RBP12.9□□□□□ -0.34
SEC13-211ENST00000431352 DAZLQ92904 295 aaKnown RBP12.9□□□□□ -0.34
SEC13-211ENST00000431352 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
SEC13-211ENST00000431352 TSPAN17Q96FV3 270 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 SMC6Q96SB8 1091 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 KRT12Q99456 494 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 MAPKAP1Q9BPZ7 522 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 KCNF1Q9H3M0 494 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 NT5DC2Q9H857 520 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 POPDC3Q9HBV1 291 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 PNPLA3Q9NST1 481 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 ZNF490Q9ULM2 529 aaPredicted RBP12.9□□□□□ -0.34
SEC13-211ENST00000431352 RNF112Q9ULX5 631 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 HIVEP1P15822 2718 aa12.9□□□□□ -0.34
SEC13-211ENST00000431352 E7ESA3 106 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 SAP18O00422 153 aaKnown RBP12.89□□□□□ -0.35
SEC13-211ENST00000431352 CTNSO60931 367 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 WISP3O95389 354 aaPredicted RBP12.89□□□□□ -0.35
SEC13-211ENST00000431352 CD1DP15813 335 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 CAPN3P20807 821 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 SSTR1P30872 391 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 MAGEA5P43359 124 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 KCNC1P48547 511 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 DNASE1L1P49184 302 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 GNG11P61952 73 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 IRF8Q02556 426 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 CHIT1Q13231 466 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 EFTUD2Q15029 972 aaKnown RBP eCLIP12.89□□□□□ -0.352e-8■■■■■ 42.6
SEC13-211ENST00000431352 ZNF793Q6ZN11 406 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 GK5Q6ZS86 529 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 FAM47EQ6ZV65 393 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 UBE3DQ7Z6J8 389 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 TMEM200AQ86VY9 491 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 OR4N5Q8IXE1 308 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 ACBD4Q8NC06 268 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 OR10Q1Q8NGQ4 319 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 PYROXD1Q8WU10 500 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 SCYL1Q96KG9 808 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 KCNC2Q96PR1 638 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 MCMBPQ9BTE3 642 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 EFCAB11Q9BUY7 163 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 PITHD1Q9GZP4 211 aaPredicted RBP12.89□□□□□ -0.35
SEC13-211ENST00000431352 DPH5Q9H2P9 285 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 EHD1Q9H4M9 534 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 KCNJ16Q9NPI9 418 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 PRDM7Q9NQW5 492 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 COPS7AQ9UBW8 275 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 ZNF407Q9C0G0 2248 aa12.89□□□□□ -0.35
SEC13-211ENST00000431352 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 ZNF354AO60765 605 aaPredicted RBP12.88□□□□□ -0.35
SEC13-211ENST00000431352 ATP6AP2O75787 350 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 TOXO94900 526 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 CELA3AP09093 270 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 CCL3P10147 92 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 STMN1P16949 149 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 SSR2P43308 183 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 RNF4P78317 190 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 DDX39BQ13838 428 aaKnown RBP12.88□□□□□ -0.35
SEC13-211ENST00000431352 HIST2H2ACQ16777 129 aaPredicted RBP12.88□□□□□ -0.35
SEC13-211ENST00000431352 GXYLT1Q4G148 440 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 PAGE2BQ5JRK9 111 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 HIST2H2AA3Q6FI13 130 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 CTAGE3PQ8IX95 158 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 TMEM251Q8N6I4 163 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 ACOT4Q8N9L9 421 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 MORN4Q8NDC4 146 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 LILRB4Q8NHJ6 448 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 DOK4Q8TEW6 326 aa12.88□□□□□ -0.35
SEC13-211ENST00000431352 CDKL2Q92772 493 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms