RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	TRBV11-1	A0A0K0K1C0	115 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	SUPT3H	B4E1H0	165 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	FCHO1	O14526	889 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	SUPT3H	O75486	399 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	SCEL	O95171	688 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	C2	P06681	752 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	MSH2	P43246	934 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	HLCS	P50747	726 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	IRF9	Q00978	393 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	ALDH6A1	Q02252	535 aa	Known RBP	16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	TGM3	Q08188	693 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	SLC13A2	Q13183	592 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	BMPR2	Q13873	1038 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	TESK1	Q15569	626 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	C3AR1	Q16581	482 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	KRTCAP3	Q53RY4	240 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	MROH9	Q5TGP6	573 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	MED27	Q6P2C8	311 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	RELL1	Q8IUW5	271 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	FAM98A	Q8NCA5	519 aa	Known RBP	16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	SRFBP1	Q8NEF9	429 aa	Known RBP	16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	KCTD4	Q8WVF5	259 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	NCLN	Q969V3	563 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	MTFMT	Q96DP5	389 aa	Known RBP	16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	TBCD	Q9BTW9	1192 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	FUT8	Q9BYC5	575 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	ROGDI	Q9GZN7	287 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	COPS7B	Q9H9Q2	264 aa	Predicted RBP	16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	LYRM4	Q9HD34	91 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	SNX15	Q9NRS6	342 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	PNO1	Q9NRX1	252 aa	Known RBP	16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	OPTC	Q9UBM4	332 aa		16.52	■□□□□ 0.24
MRPL28-203	ENST00000429738	SPG11	Q96JI7	2443 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	TMEM200C	A6NKL6	621 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	SYCE1L	A8MT33	242 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	C19orf84	I3L1E1	186 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	KLK8	O60259	260 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	CTNS	O60931	367 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	ATP5A1	P25705	553 aa	Known RBP	16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	RCN2	Q14257	317 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	SETDB1	Q15047	1291 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	ELAVL1	Q15717	326 aa	Known RBP	16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	MAPKAPK3	Q16644	382 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	TMEM35A	Q53FP2	167 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	UBAP2	Q5T6F2	1119 aa	Known RBP	16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	GRHL2	Q6ISB3	625 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	SPNS3	Q6ZMD2	512 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738		Q6ZPB1	254 aa	Predicted RBP	16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	CLNK	Q7Z7G1	428 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	OR7G3	Q8NG95	312 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	GPR78	Q96P69	363 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	VTI1B	Q9UEU0	232 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	TSC22D4	Q9Y3Q8	395 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	NF1	P21359	2839 aa		16.51	■□□□□ 0.23
MRPL28-203	ENST00000429738	RTCA	O00442	366 aa	Known RBP	16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	PRKN	O60260	465 aa	Predicted RBP	16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	ITGA10	O75578	1167 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	KLHL2	O95198	593 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	CLDN14	O95500	239 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	MLYCD	O95822	493 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	ALDOA	P04075	364 aa	Known RBP	16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	EPB42	P16452	691 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	HIST1H1T	P22492	207 aa	Predicted RBP	16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	SERPINB1	P30740	379 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	KIR3DL1	P43629	444 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	KRTAP10-9	P60411	292 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	ACAP2	Q15057	778 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	WHAMMP3	Q1A5X7	153 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	FAM83E	Q2M2I3	478 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	RNFT1	Q5M7Z0	435 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	TMEM132C	Q8N3T6	1108 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	CPSF7	Q8N684	471 aa	Known RBP	16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	ACOT4	Q8N9L9	421 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	C16orf45	Q96MC5	204 aa	Predicted RBP	16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	MAPKAP1	Q9BPZ7	522 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	ACSS3	Q9H6R3	686 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	NINJ2	Q9NZG7	142 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	TINAG	Q9UJW2	476 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738	NAV3	Q8IVL0	2385 aa		16.5	■□□□□ 0.23
MRPL28-203	ENST00000429738		A0A096LPK6	155 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	NPIPA5	E9PKD4	350 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	ASNA1	O43681	348 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	ZFAND5	O76080	213 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	TGFB1	P01137	390 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	PCBP2	Q15366	365 aa	Known RBP eCLIP	16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	CDSN	Q15517	529 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	KRTAP21-3	Q3LHN1	58 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	DEPDC1	Q5TB30	811 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	KHDRBS2	Q5VWX1	349 aa	Known RBP	16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	SPPL2C	Q8IUH8	684 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	CHERP	Q8IWX8	916 aa	Known RBP	16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	MMGT1	Q8N4V1	131 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	TEX9	Q8N6V9	391 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	PTPMT1	Q8WUK0	201 aa	Predicted RBP	16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	ISL2	Q96A47	359 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	TMEM125	Q96AQ2	219 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	MRRF	Q96E11	262 aa	Known RBP	16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	C14orf79	Q96F83	325 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	CMTM7	Q96FZ5	175 aa		16.49	■□□□□ 0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms