RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 FAIM2Q9BWQ8 316 aa16.12■□□□□ 0.17
LINC00887-203ENST00000429578 ASPSCR1Q9BZE9 553 aa16.12■□□□□ 0.17
LINC00887-203ENST00000429578 REEP4Q9H6H4 257 aa16.12■□□□□ 0.17
LINC00887-203ENST00000429578 ZNF304Q9HCX3 659 aa16.12■□□□□ 0.17
LINC00887-203ENST00000429578 CACNA1BQ00975 2339 aa16.12■□□□□ 0.17
LINC00887-203ENST00000429578 FAM234BA2RU67 622 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 SCAMP2O15127 329 aaKnown RBP16.11■□□□□ 0.17
LINC00887-203ENST00000429578 CHST10O43529 356 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 CPNE3O75131 537 aaKnown RBP16.11■□□□□ 0.17
LINC00887-203ENST00000429578 NTRK1P04629 796 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 FURINP09958 794 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 CD1EP15812 388 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 DDCP20711 480 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 CPN2P22792 545 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 BUD31P41223 144 aaPredicted RBP16.11■□□□□ 0.17
LINC00887-203ENST00000429578 OR1D4P47884 311 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 ZFP36L2P47974 494 aaKnown RBP16.11■□□□□ 0.17
LINC00887-203ENST00000429578 POLR2JP52435 117 aaKnown RBP16.11■□□□□ 0.17
LINC00887-203ENST00000429578 MC1RQ01726 317 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 TNFRSF17Q02223 184 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 RCAN2Q14206 197 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 DPY19L1Q2PZI1 675 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 C3orf38Q5JPI3 329 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 BLOC1S3Q6QNY0 202 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 R3HCC1LQ7Z5L2 792 aaKnown RBP16.11■□□□□ 0.17
LINC00887-203ENST00000429578 MIEF1Q9NQG6 463 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 SATB2Q9UPW6 733 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 B3GALT1Q9Y5Z6 326 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 MAU2Q9Y6X3 613 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 C1orf226A1L170 272 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 PMS2P1A4D2B8 440 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 FAM149AA5PLN7 773 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 EBAG9O00559 213 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 AIFM1O95831 613 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 RAB38P57729 211 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 ABHD18Q0P651 414 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 PDE7AQ13946 482 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 DSG2Q14126 1118 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 KRT72Q14CN4 511 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 UGT8Q16880 541 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 C1orf189Q5VU69 101 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 C18orf63Q68DL7 685 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 TMPRSS7Q7RTY8 843 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 NUDT8Q8WV74 236 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 PRPF18Q99633 342 aaKnown RBP16.11■□□□□ 0.17
LINC00887-203ENST00000429578 PRDM9Q9NQV7 894 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 EHD3Q9NZN3 535 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 HCN3Q9P1Z3 774 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 ATP6V1HQ9UI12 483 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 MAP4K5Q9Y4K4 846 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 PCDHGA3Q9Y5H0 932 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 PCDHA9Q9Y5H5 950 aa16.11■□□□□ 0.17
LINC00887-203ENST00000429578 KMT2BQ9UMN6 2715 aaPredicted RBP16.11■□□□□ 0.17
LINC00887-203ENST00000429578 GABRR3A8MPY1 467 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 C9JVG2 144 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 CYR61O00622 381 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 RRP9O43818 475 aaKnown RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 NR2F6P10588 404 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 RNH1P13489 461 aaKnown RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 COX7A2P14406 83 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ZNF28P17035 718 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ITGAXP20702 1163 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 TLX1P31314 330 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 RORAP35398 523 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ALDH9A1P49189 494 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 KCNK10P57789 538 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 MAT1AQ00266 395 aaKnown RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 MAPRE2Q15555 327 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 FAM174BQ3ZCQ3 159 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 TMEM164Q5U3C3 297 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ZNF385CQ66K41 422 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 FOXR1Q6PIV2 292 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 GK5Q6ZS86 529 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 CAMKMTQ7Z624 323 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 DSELQ8IZU8 1212 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 MMP21Q8N119 569 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 OR51Q1Q8NH59 317 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 RP9Q8TA86 221 aaKnown RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ADAMTS18Q8TE60 1221 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 TSPEARQ8WU66 669 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ZCCHC14Q8WYQ9 949 aaKnown RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 COL26A1Q96A83 441 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 CMTM5Q96DZ9 223 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ZNF764Q96H86 408 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-203ENST00000429578 LRFN5Q96NI6 719 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 CSF3RQ99062 836 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 ULBP3Q9BZM4 244 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 WDR41Q9HAD4 459 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 PCDHGA8Q9Y5G5 932 aa16.1■□□□□ 0.17
LINC00887-203ENST00000429578 DYTNA2CJ06 578 aa16.09■□□□□ 0.17
LINC00887-203ENST00000429578 TBX19O60806 448 aa16.09■□□□□ 0.17
LINC00887-203ENST00000429578 KIAA0754O94854 1291 aa16.09■□□□□ 0.17
LINC00887-203ENST00000429578 ONECUT2O95948 504 aa16.09■□□□□ 0.17
LINC00887-203ENST00000429578 IL6P05231 212 aa16.09■□□□□ 0.17
LINC00887-203ENST00000429578 SNRPB2P08579 225 aaKnown RBP16.09■□□□□ 0.17
LINC00887-203ENST00000429578 PIM1P11309 404 aaPredicted RBP16.09■□□□□ 0.17
LINC00887-203ENST00000429578 FBLP22087 321 aaKnown RBP16.09■□□□□ 0.17
LINC00887-203ENST00000429578 PRDX6P30041 224 aa16.09■□□□□ 0.17
LINC00887-203ENST00000429578 SRSF11Q05519 484 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms