RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 CA13Q8N1Q1 262 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 ZNF655Q8N720 491 aaPredicted RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 FAM47BQ8NA70 645 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 OR8J2Q8NGG1 315 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 RHBDD1Q8TEB9 315 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 WDR60Q8WVS4 1066 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 NAT6Q93015 286 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 MCUR1Q96AQ8 359 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 PPCDCQ96CD2 204 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 SERINC2Q96SA4 455 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 CENPKQ9BS16 269 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 RBCK1Q9BYM8 510 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 CHRNA10Q9GZZ6 450 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 KCMF1Q9P0J7 381 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 TMEM181Q9P2C4 612 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 SLC7A8Q9UHI5 535 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 ACSL6Q9UKU0 697 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 NAALAD2Q9Y3Q0 740 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 PCDHA9Q9Y5H5 950 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 A0A096LPI6 279 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 DYTNA2CJ06 578 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 FITM1A5D6W6 292 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 PRORSD1PA6NEY8 169 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 D6RAR5 112 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 FAM227AF5H4B4 570 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 PROM1O43490 865 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 CBFA2T3O75081 653 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 TIAF1O95411 115 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 ABCB1P08183 1280 aaPredicted RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 C8orf89P0DMQ9 161 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 CKMT2P17540 419 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 TCN1P20061 433 aaPredicted RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 ACP1P24666 158 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 SOX11P35716 441 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 GCGRP47871 477 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 CDK9P50750 372 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 ARFIP1P53367 373 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 TRA2BP62995 288 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 ELF3P78545 371 aaPredicted RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 SHC2P98077 582 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 TNFRSF17Q02223 184 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 ID2Q02363 134 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 SRSF11Q05519 484 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 SLC9A5Q14940 896 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 C16orf72Q14CZ0 275 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 CCDC157Q569K6 752 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 LRIF1Q5T3J3 769 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 NANOGP8Q6NSW7 305 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 ABHD13Q7L211 337 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 ZNF551Q7Z340 670 aaPredicted RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 TMEM151BQ8IW70 566 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 SLC15A3Q8IY34 581 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 FAM9CQ8IZT9 166 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 PCYOX1LQ8NBM8 494 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 SRFBP1Q8NEF9 429 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 OR4D9Q8NGE8 314 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 PMEPA1Q969W9 287 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 ROPN1LQ96C74 230 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 CCDC124Q96CT7 223 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 ZNF501Q96CX3 271 aaPredicted RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 CCDC115Q96NT0 180 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 GFM1Q96RP9 751 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 CGREF1Q99674 301 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 CPPED1Q9BRF8 314 aaPredicted RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 BHLHE41Q9C0J9 482 aaPredicted RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 NANOGQ9H9S0 305 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 APMAPQ9HDC9 416 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 TMEM9BQ9NQ34 198 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 MIEF1Q9NQG6 463 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 IRAK4Q9NWZ3 460 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 FAM120CQ9NX05 1096 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 OCIAD1Q9NX40 245 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 LYARQ9NX58 379 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 SIDT1Q9NXL6 827 aaKnown RBP8.39□□□□□ -1.07
SMC6-204ENST00000428868 ADA2Q9NZK5 511 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 HCN3Q9P1Z3 774 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 PDP2Q9P2J9 529 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 NCDNQ9UBB6 729 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 ABCD2Q9UBJ2 740 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 FTSJ1Q9UET6 329 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 CD300AQ9UGN4 299 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 CES1P1Q9UKY3 287 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 DAPP1Q9UN19 280 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 PCDHB14Q9Y5E9 798 aa8.39□□□□□ -1.07
SMC6-204ENST00000428868 C1orf226A1L170 272 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 HYKKA2RU49 373 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 PMS2P1A4D2B8 440 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 OR2W5A6NFC9 320 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 URADA6NGE7 173 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 TGFBR3LH3BV60 316 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 RFXANKO14593 260 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 PDPK1O15530 556 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 ZSCAN9O15535 394 aaPredicted RBP8.38□□□□□ -1.07
SMC6-204ENST00000428868 B3GALT2O43825 422 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 SRPX2O60687 465 aaPredicted RBP8.38□□□□□ -1.07
SMC6-204ENST00000428868 TBX19O60806 448 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 DNAJA2O60884 412 aa8.38□□□□□ -1.07
SMC6-204ENST00000428868 B4GALT2O60909 372 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms