RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
HDAC6-206ENST00000426196 IL18BPO95998 194 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 C8GP07360 202 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 RFPL3SP0C7P2 107 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 FPR1P21462 350 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 MGAT1P26572 445 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 CPA2P48052 419 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 AGFG1P52594 562 aaKnown RBP13.05□□□□□ -0.32
HDAC6-206ENST00000426196 SP140Q13342 867 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 CTBP1Q13363 440 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 OASLQ15646 514 aaKnown RBP13.05□□□□□ -0.32
HDAC6-206ENST00000426196 SLC22A10Q63ZE4 541 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 ZNF470Q6ECI4 717 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 NEPROQ6NW34 567 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 LRRC25Q8N386 305 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-206ENST00000426196 MORN4Q8NDC4 146 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 TRPV3Q8NET8 790 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 OR8K3Q8NH51 312 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 OR14A16Q8NHC5 309 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 CD200R1Q8TD46 325 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 SNF8Q96H20 258 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 FAR2Q96K12 515 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 RBM24Q9BX46 236 aaKnown RBP13.05□□□□□ -0.32
HDAC6-206ENST00000426196 OR8D2Q9GZM6 311 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 PARVBQ9HBI1 364 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 SYBUQ9NX95 663 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 JKAMPQ9P055 326 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 SOX13Q9UN79 622 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 MED16Q9Y2X0 877 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 MED12LQ86YW9 2145 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 PABPN1LA6NDY0 278 aaKnown RBP13.04□□□□□ -0.32
HDAC6-206ENST00000426196 LIASO43766 372 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 SMIM10L1P0DMW3 83 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 ETS1P14921 441 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 RPL22P35268 128 aaKnown RBP13.04□□□□□ -0.32
HDAC6-206ENST00000426196 RNF4P78317 190 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 CSHL1Q14406 222 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 TOR1AIP1Q5JTV8 583 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 PRUNE1Q86TP1 453 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 SPNS2Q8IVW8 549 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 ZNF595Q8IYB9 648 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 RASGEF1CQ8N431 466 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 SMIM10Q96HG1 83 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 JSRP1Q96MG2 331 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-206ENST00000426196 WDR83Q9BRX9 315 aaKnown RBP13.04□□□□□ -0.32
HDAC6-206ENST00000426196 FRMD8P1Q9BZ68 369 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-206ENST00000426196 KLHL31Q9H511 634 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 UBTD1Q9HAC8 227 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 NDRG3Q9UGV2 375 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 ADAMTS6Q9UKP5 1117 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 AMFRQ9UKV5 643 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 CLDN16Q9Y5I7 305 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 COMMD10Q9Y6G5 202 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 MED12Q93074 2177 aa13.04□□□□□ -0.32
HDAC6-206ENST00000426196 SYCE3A1L190 88 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 MBD3L4A6NDZ8 208 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 MBD3L5A6NJ08 208 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 LRRC3CA6NJW4 275 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 CD8B2A6NJW9 211 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 ZNF354AO60765 605 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 SERPINA6P08185 405 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 HIST1H2AGP0C0S8 130 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 HIST1H2ADP20671 130 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 SAT1P21673 171 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 GDF1P27539 372 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 CYLC1P35663 651 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 RGS4P49798 205 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 RAB38P57729 211 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 STXBP1P61764 594 aaKnown RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 BTN3A2P78410 334 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 BASP1P80723 227 aaKnown RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 CRYZQ08257 329 aaKnown RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 DUSP8Q13202 625 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 PRAMEF20Q5VT98 475 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 DUPD1Q68J44 220 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 PEX26Q7Z412 305 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 CLNKQ7Z7G1 428 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 CCDC170Q8IYT3 715 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 FAM47BQ8NA70 645 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 SLC22A8Q8TCC7 542 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 SLC5A11Q8WWX8 675 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 PYCR2Q96C36 320 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 NTNG2Q96CW9 530 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 HIST1H2AHQ96KK5 128 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 TIMP4Q99727 224 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 HIST1H2AJQ99878 128 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 H2AFJQ9BTM1 129 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 NPLQ9BXD5 320 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 TSGA10Q9BZW7 698 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 SPNS1Q9H2V7 528 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 FBXO6Q9NRD1 293 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 GALNT8Q9NY28 637 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 COPS7AQ9UBW8 275 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 TRMT6Q9UJA5 497 aaKnown RBP13.03□□□□□ -0.32
HDAC6-206ENST00000426196 CAMK2AQ9UQM7 478 aa13.03□□□□□ -0.32
HDAC6-206ENST00000426196 A0A088AWK7 358 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 GRID2IPA4D2P6 1211 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms