RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 OR1E2P47887 323 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 FLT3LGP49771 235 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 RPS13P62277 151 aaKnown RBP14.53□□□□□ -0.08
C9orf3-204ENST00000424143 SLC7A9P82251 487 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 YIF1BQ5BJH7 314 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 NXNL2Q5VZ03 156 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 C22orf39Q6P5X5 142 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 SYCE2Q6PIF2 218 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 BRAT1Q6PJG6 821 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 NANOGNBQ7Z5D8 188 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 TMEM173Q86WV6 379 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-204ENST00000424143 LRRC56Q8IYG6 542 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-204ENST00000424143 Q8N9G6 341 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-204ENST00000424143 OR52J3Q8NH60 311 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 C16orf78Q8WTQ4 265 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 TTC9Q92623 222 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 DEPDC7Q96QD5 511 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 KCNS3Q9BQ31 491 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 FUZQ9BT04 418 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 CNPPD1Q9BV87 410 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 MIR1-1HGQ9H1L0 117 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 FAM83DQ9H4H8 585 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 C14orf119Q9NWQ9 140 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 B4GALT6Q9UBX8 382 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 MBD1Q9UIS9 605 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-204ENST00000424143 KLHL21Q9UJP4 597 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 HCN1O60741 890 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 OPN1SWP03999 348 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 MAGP20916 626 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 IMPA1P29218 277 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 HLA-FP30511 346 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 VIPR1P32241 457 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 DSTNP60981 165 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 CYP4F2P78329 520 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 MRPS15P82914 257 aaKnown RBP14.52□□□□□ -0.08
C9orf3-204ENST00000424143 HYAL2Q12891 473 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 RAB33AQ14088 237 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 DUSP6Q16828 381 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 SLC35F1Q5T1Q4 408 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 SERPINA13PQ6UXR4 307 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 ZNF852Q6ZMS4 543 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 NOXA1Q86UR1 476 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 GALNT12Q8IXK2 581 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 CDC26Q8NHZ8 85 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 CREB3L4Q8TEY5 395 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 FOPNLQ96NB1 174 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 ZSCAN5AQ9BUG6 496 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 SGPP1Q9BX95 441 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 POLDIP3Q9BY77 421 aaKnown RBP14.52□□□□□ -0.08
C9orf3-204ENST00000424143 ABCG8Q9H221 673 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 DMRT3Q9NQL9 472 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 DDX28Q9NUL7 540 aaKnown RBP14.52□□□□□ -0.08
C9orf3-204ENST00000424143 GABRQQ9UN88 632 aa14.52□□□□□ -0.08
C9orf3-204ENST00000424143 UPK3BL1B0FP48 263 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 UPK3BL2E5RIL1 263 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 PROM1O43490 865 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 MFN2O95140 757 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 C1GALT1C1LP0DN25 315 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 TNFRSF1BP20333 461 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 CPN2P22792 545 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 CHI3L1P36222 383 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-204ENST00000424143 GSTM5P46439 218 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 SLC9A3P48764 834 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 PRLHRP49683 370 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 GATMP50440 423 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 EPHB3P54753 998 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 ZXDBP98169 803 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 C19orf57Q0VDD7 668 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 RIN1Q13671 783 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 DDX39BQ13838 428 aaKnown RBP14.52□□□□□ -0.09
C9orf3-204ENST00000424143 SLC5A12Q1EHB4 618 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 MPEG1Q2M385 716 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 C3orf38Q5JPI3 329 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 C6orf183Q5T699 404 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 HIST2H2AA3Q6FI13 130 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 COMMD6Q7Z4G1 85 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 SAPCD2Q86UD0 394 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 PHC2Q8IXK0 858 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 TCEAL8Q8IYN2 117 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 TAGAPQ8N103 731 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 PLA2G15Q8NCC3 412 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 OR7G1Q8NGA0 311 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 HCAR2Q8TDS4 363 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 GPR151Q8TDV0 419 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 AP3S1Q92572 193 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 GTPBP3Q969Y2 492 aaKnown RBP14.52□□□□□ -0.09
C9orf3-204ENST00000424143 TMEM159Q96B96 161 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 NEURL3Q96EH8 262 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 PKP4Q99569 1192 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 COQ7Q99807 217 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 SOSTQ9BQB4 213 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 NDEL1Q9GZM8 345 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 NIPAL2Q9H841 368 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 FGF20Q9NP95 211 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-204ENST00000424143 HCN2Q9UL51 889 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 OGDHLQ9ULD0 1010 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 SNX8Q9Y5X2 465 aa14.52□□□□□ -0.09
C9orf3-204ENST00000424143 OBSL1O75147 1896 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 PCM1Q15154 2024 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 A0A1W2PQ09 198 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms