RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 LRRK2Q5S007 2527 aa8.66□□□□□ -1.02
NUP50-206ENST00000422489 SHANK1Q9Y566 2161 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 PCM1Q15154 2024 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 HMX2A2RU54 273 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ASPDHA6ND91 283 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 C17orf105B2RV13 164 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 CDK2AP1O14519 115 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 PRKNO60260 465 aaPredicted RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 OR2J2O76002 312 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 PDE9AO76083 593 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 KLHL2O95198 593 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ACSL3O95573 720 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 INHBAP08476 426 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 MTHFD2P13995 350 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ABOP16442 354 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ZNF24P17028 368 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 HIST1H1TP22492 207 aaPredicted RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 PTX3P26022 381 aaPredicted RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 TRHRP34981 398 aaPredicted RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 SERPINB8P50452 374 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 GPR143P51810 404 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 NEK2P51955 445 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 GPR85P60893 370 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 HSF1Q00613 529 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 GTF2H2Q13888 395 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 SERTAD2Q14140 314 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 SETDB1Q15047 1291 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 TERF2Q15554 542 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ELAVL1Q15717 326 aaKnown RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 CPSF6Q16630 551 aaKnown RBP eCLIP8.65□□□□□ -1.02
NUP50-206ENST00000422489 RNFT1Q5M7Z0 435 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 UBAP2Q5T6F2 1119 aaKnown RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 KHDRBS2Q5VWX1 349 aaKnown RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 GRHL2Q6ISB3 625 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 GTF2H2CQ6P1K8 395 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 MTFR2Q6P444 385 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 MDGA2Q7Z553 956 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ZNF227Q86WZ6 799 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 LAS2Q8IYD9 372 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 CENPLQ8N0S6 344 aaPredicted RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 CYP4Z2PQ8N1L4 340 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 MMGT1Q8N4V1 131 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ZNF321PQ8N8H1 164 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 MNS1Q8NEH6 495 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 HUS1BQ8NHY5 278 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 RHEBL1Q8TAI7 183 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 DOK4Q8TEW6 326 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 PTPMT1Q8WUK0 201 aaPredicted RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 RGMAQ96B86 450 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 PPWD1Q96BP3 646 aaKnown RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 CCDC120Q96HB5 630 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 FRMD6Q96NE9 622 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 MTERF1Q99551 399 aaKnown RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 CENPKQ9BS16 269 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 IPPKQ9H8X2 491 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 LYRM4Q9HD34 91 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 TIMMDC1Q9NPL8 285 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ZNF358Q9NW07 568 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 VTI1BQ9UEU0 232 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ADGRE2Q9UHX3 823 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 TINAGQ9UJW2 476 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 ZNF223Q9UK11 482 aaPredicted RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 KLF13Q9Y2Y9 288 aaPredicted RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 YARS2Q9Y2Z4 477 aaKnown RBP8.65□□□□□ -1.02
NUP50-206ENST00000422489 PCDHGA11Q9Y5H2 935 aa8.65□□□□□ -1.02
NUP50-206ENST00000422489 RELNP78509 3460 aa8.65□□□□□ -1.03
NUP50-206ENST00000422489 USP9YO00507 2555 aaPredicted RBP8.65□□□□□ -1.03
NUP50-206ENST00000422489 USP9XQ93008 2570 aaPredicted RBP8.65□□□□□ -1.03
NUP50-206ENST00000422489 COL12A1Q99715 3063 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 SYNDIG1LA6NDD5 238 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 A8MVJ9 347 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 TFECO14948 347 aaPredicted RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 CDC40O60508 579 aaKnown RBP eCLIP8.64□□□□□ -1.03
NUP50-206ENST00000422489 SIX3O95343 332 aaPredicted RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 CTAGE8P0CG41 777 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 SERPINB1P30740 379 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 TLX1P31314 330 aaPredicted RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 PIK3CGP48736 1102 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 SMSP52788 366 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 ALDH18A1P54886 795 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 RPS13P62277 151 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 PHEXP78562 749 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 PLGLB1Q02325 96 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 ZNF750Q32MQ0 723 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 TEX35Q5T0J7 233 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 LIPJQ5W064 366 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 TTC19Q6DKK2 380 aaPredicted RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 C3P1Q6ZMU1 363 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 GOLGA7Q7Z5G4 137 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 CCDC91Q7Z6B0 441 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 GPR180Q86V85 440 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 CTAGE4Q8IX94 777 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 SRRM1Q8IYB3 904 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 SLC34A3Q8N130 599 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 PLD6Q8N2A8 252 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 GHDCQ8N2G8 530 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 PTGR2Q8N8N7 351 aaPredicted RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 NOA1Q8NC60 698 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 MORN4Q8NDC4 146 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 OR5L2Q8NGL0 311 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms