RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 AP2M1Q96CW1 435 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 COQ8BQ96D53 544 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 OR5M11Q96RB7 305 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 ALOXE3Q9BYJ1 711 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 EXOSC1Q9Y3B2 195 aaKnown RBP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 ICMTO60725 284 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 CHRM5P08912 532 aaPredicted RBP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 ACADMP11310 421 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 PIPP12273 146 aaPredicted RBP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 GSTM3P21266 225 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 SMAD3P84022 425 aaKnown RBP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 ZNF763Q0D2J5 394 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 GBX1Q14549 363 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 CCDC58Q4VC31 144 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 PRSS36Q5K4E3 855 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 LAIR2Q6ISS4 152 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 REEP3Q6NUK4 255 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 YIPF7Q8N8F6 280 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 NXF2Q9GZY0 626 aaKnown RBP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 ACTL7AQ9Y615 435 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 CLCA3PQ9Y6N3 262 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 AGRPO00253 132 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 DSCR3O14972 297 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 TLX2O43763 284 aaPredicted RBP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 SSNA1O43805 119 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 SLC28A2O43868 658 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 SLC19A2O60779 497 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 SOCS5O75159 536 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 NR2F1P10589 423 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 PRKCAP17252 672 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 HLA-DMAP28067 261 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 TIA1P31483 386 aaKnown RBP eCLIP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 MANFP55145 182 aaKnown RBP11.12□□□□□ -0.63
SCN4B-202ENST00000415030 KRT74Q7RTS7 529 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 LAX1Q8IWV1 398 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 OR5H6Q8NGV6 325 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 MED16Q9Y2X0 877 aa11.12□□□□□ -0.63
SCN4B-202ENST00000415030 IQCMA0A1B0GVH7 501 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 A8MVJ9 347 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 HNRNPCL2B2RXH8 293 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 PLD2O14939 933 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 LYRM1O43325 122 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 C6orf47O95873 294 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 CFL1P23528 166 aaKnown RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 IGFBP6P24592 240 aaPredicted RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 STOMP27105 288 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 HOXA9P31269 272 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 SOX3P41225 446 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 SMSP52788 366 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 CASP9P55211 416 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 PSPHP78330 225 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 IFITM2Q01629 132 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 GPR50Q13585 617 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 SOWAHCQ53LP3 525 aaPredicted RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 TIGD3Q6B0B8 471 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 CREB3L2Q70SY1 520 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 RNF167Q9H6Y7 350 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 NMNAT1Q9HAN9 279 aaPredicted RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 ASB4Q9Y574 426 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 TRBV5-3A0A0A0MS03 114 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 ISM1B1AKI9 464 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 H3BM21 787 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 RNASET2O00584 256 aaKnown RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 SOX14O95416 240 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 PRKACBP22694 351 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 GABRR2P28476 465 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 GJA5P36382 358 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 BMPR1AP36894 532 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 OR3A3P47888 321 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 TATDN3Q17R31 274 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 SYNPOQ8N3V7 929 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 L3MBTL4Q8NA19 623 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 OR2A14Q96R47 310 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 EFCAB11Q9BUY7 163 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 ACAT2Q9BWD1 397 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 SLC7A5P2Q9GIP4 190 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 PDFQ9HBH1 243 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 CYP17A1P05093 508 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 ETFAP13804 333 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 PBLDP30039 288 aaPredicted RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 GPR17Q13304 367 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 GPRC6AQ5T6X5 926 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 METAP1DQ6UB28 335 aaPredicted RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 TPRG1Q6ZUI0 275 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 MARCH9Q86YJ5 346 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 GJD3Q8N144 294 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 CBARPQ8N350 705 aaPredicted RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 RAB42Q8N4Z0 105 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 DCAF4L2Q8NA75 395 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 ZFAND1Q8TCF1 268 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 CREB3L1Q96BA8 519 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 ZCCHC2Q9C0B9 1178 aaKnown RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 PPT2Q9UMR5 302 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 INSL6Q9Y581 213 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 CD6P30203 668 aa11.11□□□□□ -0.63
SCN4B-202ENST00000415030 SETMARQ53H47 684 aaPredicted RBP11.11□□□□□ -0.63
SCN4B-202ENST00000415030 THSD1Q9NS62 852 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms